Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303H08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.54 
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    24   0.71 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   1.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   1.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   1.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   2.9  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   8.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 505 KPGGGTEKFTFGRLDKSG 452
           +PGGGT+  TF  L+ SG
Sbjct: 110 RPGGGTKYQTFSNLNISG 127


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 5/82 (6%)
 Frame = +3

Query: 279 PQMGGYDQNFNANSNSQQYGSESGDNYPTN--NSISGNENSYDSQIFEQIAKQKKENIED 452
           P  G +  N +      QYG  +  NY +N  ++  G  N Y  Q+           I  
Sbjct: 44  PPGGDFFGNHHIQQQQLQYGYHNHQNYNSNVLSNGYGYGNYYHPQLHSHHGPPIHHQIRP 103

Query: 453 P---DLSNLPNVNFSVPPPGFK 509
           P   D   + N    VP   FK
Sbjct: 104 PILHDTQPMCNPQLQVPRTFFK 125


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +3

Query: 246 FHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENS 395
           F N+N + +  P     + + N NS  Q Y SES  N       + N +S
Sbjct: 455 FPNTNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGENSNSSS 504


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +3

Query: 246 FHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENS 395
           F N+N + +  P     + + N NS  Q Y SES  N       + N +S
Sbjct: 403 FPNTNNAIMTPPASVQTESSDNYNSFHQFYSSESSQNQVAPTGENSNSSS 452


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +3

Query: 309 NANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAK 428
           +ANS+ Q  G +   +   N+    +E + D QI+  + K
Sbjct: 177 DANSDEQDDGDDGQGSSTNNDEDDDDEETGDRQIYPWMRK 216



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = +3

Query: 279 PQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQI 422
           P  G +  N +      QYG  +  NY  N+++  N   Y +    Q+
Sbjct: 44  PPGGDFFGNHHIQQQQLQYGYHNHQNY--NSNVLSNGYGYGNYYHPQL 89


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +3

Query: 309 NANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAK 428
           +ANS+ Q  G +   +   N+    +E + D QI+  + K
Sbjct: 177 DANSDEQDDGDDGQGSSTNNDEDDDDEETGDRQIYPWMRK 216



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = +3

Query: 279 PQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQI 422
           P  G +  N +      QYG  +  NY  N+++  N   Y +    Q+
Sbjct: 44  PPGGDFFGNHHIQQQQLQYGYHNHQNY--NSNVLSNGYGYGNYYHPQL 89


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +3

Query: 87  QTKSTFENYQSQHQAFVGHTMQQIQQLEMQKHALEM 194
           Q  +TF NY   H  +   T++ +++LE   + +++
Sbjct: 414 QKTTTFMNYTDLHDLWGEFTLKALKRLERANNGVKI 449


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +3

Query: 309 NANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAK 428
           +ANS+ Q  G +   +   N+    +E + D QI+  + K
Sbjct: 177 DANSDEQDDGDDGQGSSTNNDEDDDDEETGDRQIYPWMRK 216



 Score = 22.2 bits (45), Expect = 2.9
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = +3

Query: 279 PQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQI 422
           P  G +  N +      QYG  +  NY  N+++  N   Y +    Q+
Sbjct: 44  PPGGDFFGNHHIQQQQLQYGYHNHQNY--NSNVLSNGYGYGNYYHPQL 89


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 219 FHCFLEFFASQGHVFAFPI 163
           FHC +EF    G    F I
Sbjct: 602 FHCHIEFHVEVGMALVFKI 620



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 143 HNATNTTIGN 172
           HN TNTT+ N
Sbjct: 451 HNVTNTTLQN 460


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
          castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 48 ISQHANAISHLTQQT 92
          I  H NAIS +T  T
Sbjct: 45 IESHLNAISQITNST 59


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +3

Query: 294 YDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAKQKKENIEDPDLSNL 470
           Y+Q ++ N N+ Q G  S   Y   N + G  +   + ++     Q  EN+  P+L++L
Sbjct: 237 YNQAYS-NYNNYQEGF-SCQYYQGKNCVGGKVDE-TAGVYSGWEGQVLENMPQPNLTSL 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,664
Number of Sequences: 336
Number of extensions: 1908
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)