BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303H08f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 26 0.67
AY423354-1|AAQ94040.1| 112|Anopheles gambiae defender against p... 25 1.2
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 1.5
AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative odorant-b... 23 4.7
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 4.7
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 6.2
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 23 8.2
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 26.2 bits (55), Expect = 0.67
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 105 ENYQSQHQAFVGHTMQQIQQLEMQKHALEMQK 200
ENY+ QHQ QQ QQ + Q+H E Q+
Sbjct: 896 ENYRQQHQ-----QQQQQQQQQQQQHEHEQQQ 922
>AY423354-1|AAQ94040.1| 112|Anopheles gambiae defender against
programmed cell death protein.
Length = 112
Score = 25.4 bits (53), Expect = 1.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -3
Query: 375 YCCLLGNYPHFHYHIADYLS 316
YCCL+G +P F+ +A ++S
Sbjct: 43 YCCLVGTFP-FNSFLAGFIS 61
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 25.0 bits (52), Expect = 1.5
Identities = 18/58 (31%), Positives = 21/58 (36%)
Frame = +3
Query: 9 SPTSSYQDYQNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEMQKH 182
SP SS D A Q+ N S Q Q Q Q QQL+ Q+H
Sbjct: 91 SPESSASDQSAAYTLQNLNLSSSAGTMNYPGMGYQQQQQQQQQQQQHHQHQQLQQQQH 148
>AJ697727-1|CAG26920.1| 285|Anopheles gambiae putative
odorant-binding protein OBPjj17 protein.
Length = 285
Score = 23.4 bits (48), Expect = 4.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 294 YDQNFNANSNSQQYGSESGDNYPTNNSISGNENSY 398
YD N + S QY + G NYP + N N Y
Sbjct: 243 YDDN-DGYSRGGQY-DQRGGNYPRGTERNRNGNGY 275
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.4 bits (48), Expect = 4.7
Identities = 10/56 (17%), Positives = 26/56 (46%)
Frame = +3
Query: 336 GSESGDNYPTNNSISGNENSYDSQIFEQIAKQKKENIEDPDLSNLPNVNFSVPPPG 503
G+++ P +S + + + + + ++ + P+ + P NF++P PG
Sbjct: 336 GNDNMGGGPPPSSATPSVDDDEDVVIGRLPADNSSALNSPNPARAPPRNFTMPGPG 391
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.0 bits (47), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 114 QSQHQAFVGHTMQQIQQLEMQKH 182
Q QH + VG +QQ QQ + Q+H
Sbjct: 82 QRQHPSLVGPQLQQ-QQQQHQQH 103
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 22.6 bits (46), Expect = 8.2
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +3
Query: 27 QDYQNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEMQKHALEMQK 200
Q Q Q QQ + + Q QHQ Q++QQ + Q+H + Q+
Sbjct: 237 QQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQ-QNQQHQRQQQQ 293
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,949
Number of Sequences: 2352
Number of extensions: 8300
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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