Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303H08f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 44 9e-05
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.094
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 31 0.38
U55364-5|AAQ23124.1| 368|Caenorhabditis elegans Prion-like-(q/n... 31 0.50
U55364-4|AAA97972.1| 382|Caenorhabditis elegans Prion-like-(q/n... 31 0.50
AL023493-2|CAD44137.1| 909|Caenorhabditis elegans Hypothetical ... 30 0.87
AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical ... 30 0.87
Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical p... 30 1.2
Z81030-11|CAE17704.1| 100|Caenorhabditis elegans Hypothetical p... 29 2.0
Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 29 2.0
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 29 2.0
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 29 2.0
Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 29 2.7
U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical pr... 29 2.7
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 29 2.7
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 29 2.7
AF043699-4|AAB97568.1| 610|Caenorhabditis elegans Serotonin/oct... 29 2.7
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 29 2.7
AF016662-7|AAB66060.1| 561|Caenorhabditis elegans Hypothetical ... 29 2.7
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical pr... 28 4.7
U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog (hedg... 28 4.7
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 28 4.7
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 28 4.7
U23147-5|AAC46686.2| 308|Caenorhabditis elegans Hypothetical pr... 27 6.2
L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical pr... 27 6.2
AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin pr... 27 6.2
AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated... 27 6.2
AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated... 27 6.2
AF003151-2|AAK18919.3| 277|Caenorhabditis elegans Prion-like-(q... 27 6.2
Z54235-7|CAA90974.3| 611|Caenorhabditis elegans Hypothetical pr... 27 8.1
U53335-5|AAY86255.1| 233|Caenorhabditis elegans Hypothetical pr... 27 8.1
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 27 8.1
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 27 8.1
U37548-5|ABM01869.1| 224|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF025464-2|AAN84804.1| 496|Caenorhabditis elegans Prion-like-(q... 27 8.1
AF025464-1|AAN84805.1| 529|Caenorhabditis elegans Prion-like-(q... 27 8.1
AC025726-4|AAK73922.1| 198|Caenorhabditis elegans Prion-like-(q... 27 8.1
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 43.6 bits (98), Expect = 9e-05
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Frame = +3
Query: 240 GN-FHNSNFSDIGY-----PQMGGYDQNFNANSNSQQ-YGSESGDNYPTNNSISGNENSY 398
GN ++N+N ++ GY Q GY+ N+N N+N QQ + + + +NY NN + N +
Sbjct: 38 GNQYYNNNNNNNGYYNQQQQQFNGYNNNYNNNNNQQQQFYNNNNNNYNNNNYNNNNNYNQ 97
Query: 399 DSQIFEQIAKQKKENIEDP 455
Q +Q +Q ++ ++ P
Sbjct: 98 QPQGAQQPQQQVQQQVQQP 116
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.094
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = +3
Query: 156 IQQLEMQKHALEMQKTXXXXXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQY 335
+QQ Q+ A + Q + GN +N Q GGY+Q N N QY
Sbjct: 128 MQQCTQQQTAQQCQPICQQQCQQECGSTGNMMYNNQDPYNQMQYGGYNQQGNQYQNQNQY 187
Query: 336 GSESGDNYPTNNSISGNENSYD 401
+ + N + N+N Y+
Sbjct: 188 QNPNQIQNQYNQNQYQNQNYYN 209
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 31.5 bits (68), Expect = 0.38
Identities = 29/97 (29%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Frame = +3
Query: 234 NMGNFHNSNFSDIGYPQMGGYDQNF-NANSNSQQYGSESGDNYPTNNSISGNENSYDSQI 410
N GN N+N S G G + N NSNS S +G+ NS +GN NS +
Sbjct: 205 NSGNSSNNNNSS-GNSNYGSNNSGSGNGNSNSGNGNSGNGNGNNAGNSGNGNGNSNGNNG 263
Query: 411 FEQIAKQKKENIEDPDLSN---LPNVNFSVPPPGFKP 512
N + +N P + VPP G+ P
Sbjct: 264 NGSNGNGNGNNGNGNNGNNGNGHPQYPYPVPPHGYYP 300
Score = 30.3 bits (65), Expect = 0.87
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 231 SNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGN 386
SN GN ++ N + G + N N N+ + G+ +G+N NN +GN
Sbjct: 233 SNSGNGNSGNGNGNNAGNSGNGNGNSNGNNGNGSNGNGNGNNGNGNNGNNGN 284
>U55364-5|AAQ23124.1| 368|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform b protein.
Length = 368
Score = 31.1 bits (67), Expect = 0.50
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 1/134 (0%)
Frame = +3
Query: 9 SPTSSYQDYQNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQ-QLEMQKHA 185
S YQ Q A Q+ + S L +T + Q G T Q Q Q++ Q+++
Sbjct: 23 STNQQYQPSQGAQYDQYGS--STLQYNNGATAQPIQYNQNQQYGSTAQYNQNQMQNQQNS 80
Query: 186 LEMQKTXXXXXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPT 365
+ T SNM N NSN G G ++A N Q G +SG
Sbjct: 81 NQYSTT---------SNMNNQQNSNQYQQGQQNNYGTQAQYDAGQN--QMG-QSGQVQGY 128
Query: 366 NNSISGNENSYDSQ 407
+N+ N+NS SQ
Sbjct: 129 SNNGYSNQNSQMSQ 142
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +3
Query: 234 NMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQ 407
N N N G Q Y Q N N+QQY ++GD TN G+ N+ Q
Sbjct: 291 NGQNGQNQFQQSNGQNQNSQYQQTSNQQMNNQQY--QTGDYQQTNTQSMGSPNTGTQQ 346
>U55364-4|AAA97972.1| 382|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform a protein.
Length = 382
Score = 31.1 bits (67), Expect = 0.50
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 1/134 (0%)
Frame = +3
Query: 9 SPTSSYQDYQNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQ-QLEMQKHA 185
S YQ Q A Q+ + S L +T + Q G T Q Q Q++ Q+++
Sbjct: 37 STNQQYQPSQGAQYDQYGS--STLQYNNGATAQPIQYNQNQQYGSTAQYNQNQMQNQQNS 94
Query: 186 LEMQKTXXXXXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPT 365
+ T SNM N NSN G G ++A N Q G +SG
Sbjct: 95 NQYSTT---------SNMNNQQNSNQYQQGQQNNYGTQAQYDAGQN--QMG-QSGQVQGY 142
Query: 366 NNSISGNENSYDSQ 407
+N+ N+NS SQ
Sbjct: 143 SNNGYSNQNSQMSQ 156
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +3
Query: 234 NMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQ 407
N N N G Q Y Q N N+QQY ++GD TN G+ N+ Q
Sbjct: 305 NGQNGQNQFQQSNGQNQNSQYQQTSNQQMNNQQY--QTGDYQQTNTQSMGSPNTGTQQ 360
>AL023493-2|CAD44137.1| 909|Caenorhabditis elegans Hypothetical
protein H20J18.1b protein.
Length = 909
Score = 30.3 bits (65), Expect = 0.87
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 MKSPTSSYQDY-QNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEMQK 179
++ P Q+ Q LI Q N I QQ + Q Q QA QQ+QQL Q+
Sbjct: 421 LQGPQGQAQNQMQQQLIQQQLNQILARNQQQQQQQMQQQLQQQASNNALQQQLQQLVEQQ 480
Query: 180 HALEMQK 200
+ Q+
Sbjct: 481 RQQQQQQ 487
>AL023493-1|CAA18898.1| 947|Caenorhabditis elegans Hypothetical
protein H20J18.1a protein.
Length = 947
Score = 30.3 bits (65), Expect = 0.87
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 MKSPTSSYQDY-QNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEMQK 179
++ P Q+ Q LI Q N I QQ + Q Q QA QQ+QQL Q+
Sbjct: 421 LQGPQGQAQNQMQQQLIQQQLNQILARNQQQQQQQMQQQLQQQASNNALQQQLQQLVEQQ 480
Query: 180 HALEMQK 200
+ Q+
Sbjct: 481 RQQQQQQ 487
>Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +3
Query: 36 QNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEMQKHALEMQKT 203
+ A +H AI L + K+ + +S+ ++ + ++++E Q+ ALE Q+T
Sbjct: 68 RKAAEERHNKAIEELKRSHKNDKKKLESELESIKRKGEKDVREIEQQREALEKQRT 123
>Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +3
Query: 36 QNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQQLEMQKHALEMQKT 203
+ A +H AI L + K+ + +S+ ++ + ++++E Q+ ALE Q+T
Sbjct: 68 RKAAEERHNKAIEELKRSHKNDKKKLESELESIKRKGEKDVREIEQQREALEKQRT 123
>Z81030-11|CAE17704.1| 100|Caenorhabditis elegans Hypothetical
protein C01G10.15 protein.
Length = 100
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 243 NFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISG--NENSY 398
N +N+N ++ GY Y N N N+N Q Y + Y NN SG N N Y
Sbjct: 29 NGYNNNNNN-GYTTYYYYPNNNNNNNNGQTYYYYDNNGY--NNGCSGCSNNNGY 79
>Z32679-3|CAA83596.1| 401|Caenorhabditis elegans Hypothetical
protein C05B5.3 protein.
Length = 401
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +3
Query: 234 NMGN-FHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQ 407
N GN F + G+ +QN N+N N Q + N ++ N+N +SQ
Sbjct: 138 NFGNGFQGGQNQNTGFSSGFFNNQNQNSNQNLNQNNFQQNQNLGASSGFFNNQNQQNSQ 196
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 231 SNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYP 362
SN+ F+ +N S+ GYPQ+ GY N+ + YG YP
Sbjct: 932 SNVPLFNITNSSN-GYPQLNGY-PNYGNGFQAYGYGMNYHQGYP 973
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 231 SNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYP 362
SN+ F+ +N S+ GYPQ+ GY N+ + YG YP
Sbjct: 1039 SNVPLFNITNSSN-GYPQLNGY-PNYGNGFQAYGYGMNYHQGYP 1080
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 273 GYPQMGG-YDQNFNANSNSQQYGS-ESGDNYPTNNSISGNENSY 398
GY Q GG Y Q + S +YGS + DNY N G N Y
Sbjct: 80 GYNQGGGGYQQQY---SQDARYGSNQRNDNYGNNRGSHGGANMY 120
>Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 4/105 (3%)
Frame = +3
Query: 96 STFENYQSQHQAFVGHTMQQIQQLEMQKHALEMQKTXXXXXXXXXSNMGNFHNSNFSDIG 275
+TF+ Y+ QH + H +QI ++E + + + + N S F
Sbjct: 267 ATFDGYEQQHVTYSQHIQRQIDEVERKIDEFRHGPSSGPASHHPNAPLSNMRRSRFDQA- 325
Query: 276 YPQMGGYDQNFNA----NSNSQQYGSESGDNYPTNNSISGNENSY 398
P+ + + N N QQ E D P + + SY
Sbjct: 326 -PKHSAERPHASVSNTWNQNDQQDDGEDIDGMPFDEENLKPQKSY 369
>U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical
protein C18F3.4 protein.
Length = 306
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +3
Query: 258 NFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAKQKK 437
NF+DI G D +F A+ + + D+ PT +S S E+ D + + K
Sbjct: 32 NFTDIRLVAKGYSDVSFVASLSQCNLRDDPNDDQPTTSSNSVKESINDDESNSENNKLSP 91
Query: 438 ENIEDPDLSNLPNVNFS 488
+ S+LP ++ S
Sbjct: 92 PRRQSNPHSSLPAISSS 108
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 243 NFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGD 353
N H+ N Q GG N NSN QQ G SG+
Sbjct: 69 NNHSGNKRQTYNNQRGGRSYNHRGNSNYQQNGEYSGN 105
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/105 (20%), Positives = 38/105 (36%), Gaps = 4/105 (3%)
Frame = +3
Query: 96 STFENYQSQHQAFVGHTMQQIQQLEMQKHALEMQKTXXXXXXXXXSNMGNFHNSNFSDIG 275
+TF+ Y+ QH + H +QI ++E + + + + N S F
Sbjct: 267 ATFDGYEQQHVTYSQHIQRQIDEVERKIDEFRHGPSSGPASHHPNAPLSNMRRSRFDQA- 325
Query: 276 YPQMGGYDQNFNA----NSNSQQYGSESGDNYPTNNSISGNENSY 398
P+ + + N N QQ E D P + + SY
Sbjct: 326 -PKHSAERPHASVSNTWNQNDQQDDGEDIDGMPFDEENLKPQKSY 369
>AF043699-4|AAB97568.1| 610|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 3 protein.
Length = 610
Score = 28.7 bits (61), Expect = 2.7
Identities = 29/137 (21%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Frame = +3
Query: 48 ISQHANAISHLTQQ-TKST-FENYQSQ---HQAFVGHTMQQIQQLEMQKHALEMQKTXXX 212
I AN S +T TK+ F N ++ ++ VG T Q ++H + + +
Sbjct: 317 IDATANGTSQITAAATKARKFANDSAKTLVNRGAVGATQQAPIGARFKRHGRDSESSVDS 376
Query: 213 XXXXXXSNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYP-TNNSISGNE 389
S H S ++G + ++N ++Q +++ DN+ +NN+ +G+E
Sbjct: 377 MNGTN-SYSATPHKSGNEELGSLIENSRSSSTDSNEKTEQLTNQTDDNFSMSNNNNNGDE 435
Query: 390 -NSYDSQIFEQIAKQKK 437
++D + + K+ K
Sbjct: 436 KEAFDESLLSESKKKSK 452
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 243 NFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGD 353
N H+ N Q GG N NSN QQ G SG+
Sbjct: 69 NNHSGNKRQTYNNQRGGRSYNHRGNSNYQQNGEYSGN 105
>AF016662-7|AAB66060.1| 561|Caenorhabditis elegans Hypothetical
protein C33C12.8 protein.
Length = 561
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 279 PQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIA 425
PQ N + S QYG ++ +N+ TN++ S +++ + Q+A
Sbjct: 18 PQRTPKSYNSSILSKYSQYGCQNSENFMTNSNFSTKNSNFSALASLQVA 66
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 231 SNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYG--SESGDNYPTNNSISGNE-NSYD 401
S G N+N +D G+ + N N N+N+ G S +G + +NN+ +GN+ N+++
Sbjct: 419 SKNGYGSNNNRND-GWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNNGNDGNNWE 477
Query: 402 S 404
S
Sbjct: 478 S 478
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 249 HNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQI 410
+ N D Y G + + N+ ++ G+E GD + +NN +G +N Y S++
Sbjct: 285 NGGNDGDSNYGNEGSWKPSGNSYGRNRGGGNEGGDQWGSNN--NGGDN-YGSEL 335
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 231 SNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYG--SESGDNYPTNNSISGNE-NSYD 401
S G N+N +D G+ + N N N+N+ G S +G + +NN+ +GN+ N+++
Sbjct: 419 SKNGYGSNNNRND-GWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNNGNDGNNWE 477
Query: 402 S 404
S
Sbjct: 478 S 478
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 249 HNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQI 410
+ N D Y G + + N+ ++ G+E GD + +NN +G +N Y S++
Sbjct: 285 NGGNDGDSNYGNEGSWKPSGNSYGRNRGGGNEGGDQWGSNN--NGGDN-YGSEL 335
>Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical
protein W01C9.3 protein.
Length = 792
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 276 YPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAKQKKENIE 449
Y + G +QN QQYG+ +G + P N+ N+N S Q+ + +++NI+
Sbjct: 482 YGMVTGQNQNPQGAQQQQQYGNGNGQS-PFQNTQYPNQNQNPS--VAQMQQLQQQNIQ 536
>U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 9 protein.
Length = 588
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 381 GNENSYDSQIFEQIAKQKKENIEDPD----LSNLPNVNFSVPPPGFKPL 515
G++N ++ E+ + Q NI D + S+ PNV +S PP PL
Sbjct: 422 GDDNGEHNREEEEESSQYSSNIRDMEQPTKYSSKPNVKYSYPPKDTLPL 470
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +3
Query: 309 NANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAKQKKENIEDP 455
N + + GD++P N S N N + ++IA Q+ +++++P
Sbjct: 139 NTQRRQLEIQEQRGDSHPQNQSRQNNRNQLN---VDRIANQQNKSVQNP 184
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 27.9 bits (59), Expect = 4.7
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +3
Query: 480 NFSVPPPGFKPLD 518
NFS+PPPG+ PL+
Sbjct: 255 NFSLPPPGYNPLN 267
>U23147-5|AAC46686.2| 308|Caenorhabditis elegans Hypothetical
protein C18H9.1 protein.
Length = 308
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +3
Query: 231 SNMGNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDNYPTNNSI 377
+N N+H N +IG G Q N N N G G N+P N I
Sbjct: 212 NNRSNYHIGNIGNIGGNIGNG--QKMNRNKNG---GRNQGGNHPDNMGI 255
>L16685-3|AAA28169.3| 321|Caenorhabditis elegans Hypothetical
protein ZC21.3 protein.
Length = 321
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +3
Query: 273 GYPQMGGYDQNFNANSNSQQY--GSESGDNYPTNNSISGNENSYDSQI 410
G+PQ +Q SN+Q Y ++ N T N+ SY +Q+
Sbjct: 162 GFPQSSNQNQVLRDQSNNQGYMNNNQGMYNTQTTQGYGNNQGSYQNQM 209
>AY394006-1|AAQ96373.1| 377|Caenorhabditis elegans endophilin
protein.
Length = 377
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 327 QQYGSESGDNYPTNNSISGNENSYD--SQIFEQIAKQKKENIEDPDLSNLPN 476
Q+YG + GDN S++ +Y + I Q+ K+N DP L++L N
Sbjct: 98 QKYGQQLGDNSDLGKSLNDAAETYRQMADIKYQMEDNVKQNFLDP-LTHLQN 148
>AF067617-2|AAC17558.3| 377|Caenorhabditis elegans Uncoordinated
protein 57, isoform a protein.
Length = 377
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 327 QQYGSESGDNYPTNNSISGNENSYD--SQIFEQIAKQKKENIEDPDLSNLPN 476
Q+YG + GDN S++ +Y + I Q+ K+N DP L++L N
Sbjct: 98 QKYGQQLGDNSDLGKSLNDAAETYRQMADIKYQMEDNVKQNFLDP-LTHLQN 148
>AF067617-1|ABQ13063.1| 379|Caenorhabditis elegans Uncoordinated
protein 57, isoform c protein.
Length = 379
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 327 QQYGSESGDNYPTNNSISGNENSYD--SQIFEQIAKQKKENIEDPDLSNLPN 476
Q+YG + GDN S++ +Y + I Q+ K+N DP L++L N
Sbjct: 98 QKYGQQLGDNSDLGKSLNDAAETYRQMADIKYQMEDNVKQNFLDP-LTHLQN 148
>AF003151-2|AAK18919.3| 277|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 24
protein.
Length = 277
Score = 27.5 bits (58), Expect = 6.2
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Frame = +3
Query: 240 GNFHNSNFSDIGYPQMGGYDQNFNANSNSQQYGSESGDN-YPTNNSISGNENSYDSQIFE 416
GN N N GG N NAN+N+ S +N + NN S N N Y
Sbjct: 115 GNSGNWNSGGNNNGASGGSWGNGNANNNNNNNNGGSNNNGWGNNNDWSSNYN-YGGSNAA 173
Query: 417 QIAKQKKENIEDPDLSN 467
K K+ + D N
Sbjct: 174 NEPKMTKQTVAGDDSWN 190
>Z54235-7|CAA90974.3| 611|Caenorhabditis elegans Hypothetical
protein C09G9.4 protein.
Length = 611
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 414 EQIAKQKKENIEDPDLSNLPNVNFSVPPPGFKP 512
E++++ KK +E+PD+ N + PPP KP
Sbjct: 33 EKVSEYKK--VENPDVENFSKSSVRPPPPEPKP 63
>U53335-5|AAY86255.1| 233|Caenorhabditis elegans Hypothetical
protein C55C3.8 protein.
Length = 233
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 91 LNLLLRIINHNTKLLLVTQCNKY 159
LN+LLR++N + KL+ N Y
Sbjct: 178 LNILLRVVNRSNKLIFTINGNDY 200
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 54 QHANAISHLTQQTKSTFENYQSQHQAFVGHTMQ-QIQQLEMQKHALEMQK 200
Q +S Q Q QH V Q Q+QQL+MQ+ A MQ+
Sbjct: 719 QSGQPLSMQQMQQLQQMSQVQMQHAQQVQQMQQMQMQQLQMQQFAARMQQ 768
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 54 QHANAISHLTQQTKSTFENYQSQHQAFVGHTMQ-QIQQLEMQKHALEMQK 200
Q +S Q Q QH V Q Q+QQL+MQ+ A MQ+
Sbjct: 2098 QSGQPLSMQQMQQLQQMSQVQMQHAQQVQQMQQMQMQQLQMQQFAARMQQ 2147
>U37548-5|ABM01869.1| 224|Caenorhabditis elegans Hypothetical
protein C54D2.6 protein.
Length = 224
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +3
Query: 27 QDYQNALISQHANAISHLTQQTKSTFENYQSQHQAFVGHTMQQIQ 161
QD++N L+ ++ IS ++ +S ++ ++ F G + QI+
Sbjct: 58 QDFRNELVKANSFLISKTSEVAESPYQPFKETAAVFAGCQINQIK 102
>AF025464-2|AAN84804.1| 496|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform a protein.
Length = 496
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +3
Query: 282 QMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAKQKKENIEDPDL 461
QM + Q + A QQ ++ N + N+ Q F+Q +Q++ +P
Sbjct: 193 QMPRHQQQYQAPQQQQQNYHQNSQNPYQQPNYQQNQYQPQLQQFQQNPRQQQHVYSNPQQ 252
Query: 462 SNLPNV-NFSVPPP 500
N N PPP
Sbjct: 253 GYQQNYQNLYTPPP 266
>AF025464-1|AAN84805.1| 529|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 42,
isoform b protein.
Length = 529
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +3
Query: 282 QMGGYDQNFNANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFEQIAKQKKENIEDPDL 461
QM + Q + A QQ ++ N + N+ Q F+Q +Q++ +P
Sbjct: 215 QMPRHQQQYQAPQQQQQNYHQNSQNPYQQPNYQQNQYQPQLQQFQQNPRQQQHVYSNPQQ 274
Query: 462 SNLPNV-NFSVPPP 500
N N PPP
Sbjct: 275 GYQQNYQNLYTPPP 288
>AC025726-4|AAK73922.1| 198|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 88
protein.
Length = 198
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 309 NANSNSQQYGSESGDNYPTNNSISGNENSYDSQIFE 416
N N N QQ + P +N+ GN+N +Q F+
Sbjct: 92 NNNQNQQQPQQQGFQTQPPSNNFFGNQNDPTNQGFQ 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,582,340
Number of Sequences: 27780
Number of extensions: 166428
Number of successful extensions: 937
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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