Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303H03f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 23 1.9
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 23 1.9
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 2.5
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 2.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 2.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 2.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 2.5
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 22 3.3
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 21 7.7
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 21 7.7
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 21 7.7
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 23.0 bits (47), Expect = 1.9
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 387 SCVVLGYLKENVTNHIYCGF-LIKQSSDRYRR 479
+C+++ L +NV NHI F +IK ++++ R
Sbjct: 44 ACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 75
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 23.0 bits (47), Expect = 1.9
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 387 SCVVLGYLKENVTNHIYCGF-LIKQSSDRYRR 479
+C+++ L +NV NHI F +IK ++++ R
Sbjct: 27 ACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 58
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -3
Query: 366 FNFYKY*RRFHDQFNKFGLIRNY 298
F +KY RF + K+G+++N+
Sbjct: 52 FMCHKYGLRFEEVSEKYGILQNW 74
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 101 QRTCLRFSNRELLKVTNSFELIY 33
+R+C R NRE K +E +Y
Sbjct: 1 ERSCSRDRNREYRKKDRQYEKLY 23
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 101 QRTCLRFSNRELLKVTNSFELIY 33
+R+C R NRE K +E +Y
Sbjct: 1 ERSCSRDRNREYRKKDRQYEKLY 23
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 101 QRTCLRFSNRELLKVTNSFELIY 33
+R+C R NRE K +E +Y
Sbjct: 1 ERSCSRDRNREYRKKDRQYEKLY 23
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 101 QRTCLRFSNRELLKVTNSFELIY 33
+R+C R NRE K +E +Y
Sbjct: 1 ERSCSRDRNREYRKKDRQYEKLY 23
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 22.2 bits (45), Expect = 3.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 144 GFNKPPDCTYC 176
G N+P +C YC
Sbjct: 1 GINEPQECPYC 11
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.0 bits (42), Expect = 7.7
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -3
Query: 411 LNNLTQHTILLCTSRFNFYKY*RRFHDQFNKFGLIRNYTSII 286
L N HT L C FY + D + + + + Y ++I
Sbjct: 78 LTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLI 119
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.0 bits (42), Expect = 7.7
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -3
Query: 411 LNNLTQHTILLCTSRFNFYKY*RRFHDQFNKFGLIRNYTSII 286
L N HT L C FY + D + + + + Y ++I
Sbjct: 83 LTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLI 124
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.0 bits (42), Expect = 7.7
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = -3
Query: 411 LNNLTQHTILLCTSRFNFYKY*RRFHDQFNKFGLIRNYTSII 286
L N HT L C FY + D + + + + Y ++I
Sbjct: 83 LTNTASHTRLSCDCDDKFYDCLKNSADTISSYFVGKMYFNLI 124
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,611
Number of Sequences: 438
Number of extensions: 2491
Number of successful extensions: 32
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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