Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303H02f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   3.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   3.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.0  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   5.0  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    21   8.7  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    21   8.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.7  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   8.7  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   8.7  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 189 EQRKTDQKTVDEAVIKAIGARPDKK 115
           ++ K D+K  D   ++A+  RP  K
Sbjct: 112 DENKLDKKNDDSPALRALLTRPQAK 136


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 189 EQRKTDQKTVDEAVIKAIGARPDKK 115
           ++ K D+K  D   ++A+  RP  K
Sbjct: 112 DENKLDKKNDDSPALRALLTRPQAK 136


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 113 CSADTSKRPSDSARANIP 60
           CSAD ++ P     AN+P
Sbjct: 167 CSADGTRIPGQLEPANVP 184


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 113 CSADTSKRPSDSARANIP 60
           CSAD ++ P     AN+P
Sbjct: 174 CSADGTRIPGQLEPANVP 191


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 189 EQRKTDQKTVDEAVIKAIGARPDKK 115
           ++ K D+K  D   ++A+  RP  K
Sbjct: 112 DENKLDKKDDDSPALRALLTRPQAK 136


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 85  EGRFEVSAEHLLVGSGSDGFDHSLVD 162
           EG FEV A       G + FD+ LV+
Sbjct: 42  EGIFEVKATAGDTHLGGEDFDNRLVE 67


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 85  EGRFEVSAEHLLVGSGSDGFDHSLVD 162
           EG FEV A       G + FD+ LV+
Sbjct: 42  EGIFEVKATAGDTHLGGEDFDNRLVE 67


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +1

Query: 367 TA*RARIESKRSSN*KQTAGQNSNKYNPLACMSTSEENANSSYL 498
           T+  + +ES   ++     G N++    L C++T   N  +  L
Sbjct: 222 TSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQL 265


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +1

Query: 367 TA*RARIESKRSSN*KQTAGQNSNKYNPLACMSTSEENANSSYL 498
           T+  + +ES   ++     G N++    L C++T   N  +  L
Sbjct: 11  TSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQL 54


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +1

Query: 367 TA*RARIESKRSSN*KQTAGQNSNKYNPLACMSTSEENANSSYL 498
           T+  + +ES   ++     G N++    L C++T   N  +  L
Sbjct: 11  TSSSSALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNKQL 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,047
Number of Sequences: 336
Number of extensions: 2509
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)