Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303G12f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY095075-1|AAM11403.1| 295|Drosophila melanogaster RE24507p pro... 30 2.2
AE014296-853|AAF47905.2| 295|Drosophila melanogaster CG15022-PA... 30 2.2
BT024965-1|ABE01195.1| 231|Drosophila melanogaster IP15245p pro... 29 3.8
AY060702-1|AAL28250.1| 159|Drosophila melanogaster GH14459p pro... 29 3.8
AE014296-380|AAF47587.2| 1122|Drosophila melanogaster CG1828-PA,... 29 3.8
AY070858-1|AAL48480.1| 94|Drosophila melanogaster GM10787p pro... 29 5.1
BT030437-1|ABO52857.1| 566|Drosophila melanogaster IP18510p pro... 28 6.7
AY051514-1|AAK92938.1| 542|Drosophila melanogaster GH16672p pro... 28 6.7
AF099734-1|AAC83828.1| 542|Drosophila melanogaster cryptochrome... 28 6.7
AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-P... 28 6.7
AE014297-2641|AAF55649.1| 542|Drosophila melanogaster CG3772-PA... 28 6.7
AE014297-633|AAF53999.2| 1148|Drosophila melanogaster CG34127-PA... 28 6.7
AB019389-1|BAA35000.1| 542|Drosophila melanogaster blue light p... 28 6.7
AB018400-1|BAA33787.1| 542|Drosophila melanogaster blue-light r... 28 6.7
>AY095075-1|AAM11403.1| 295|Drosophila melanogaster RE24507p
protein.
Length = 295
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 265 ADEDSLFPPDPEPVHRCLPPLPRQVYCLLHPKP 167
A+ ++ + P EPV + LPP P Q Y L P+P
Sbjct: 225 AEPETKYLPPSEPVEKYLPPKPEQKY--LPPQP 255
>AE014296-853|AAF47905.2| 295|Drosophila melanogaster CG15022-PA
protein.
Length = 295
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 265 ADEDSLFPPDPEPVHRCLPPLPRQVYCLLHPKP 167
A+ ++ + P EPV + LPP P Q Y L P+P
Sbjct: 225 AEPETKYLPPSEPVEKYLPPKPEQKY--LPPQP 255
>BT024965-1|ABE01195.1| 231|Drosophila melanogaster IP15245p
protein.
Length = 231
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 356 HNSRSSKNTSYLPGSNSKFTSKNLERPSELSRESLKSKD 472
H S SS ++S+L S+SK S + PS+ S++ S+D
Sbjct: 157 HKSNSSSSSSHLKSSSSKHGSSS--SPSKSSKDKYNSRD 193
>AY060702-1|AAL28250.1| 159|Drosophila melanogaster GH14459p
protein.
Length = 159
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 347 NNGHNSRSSKNTSYLPGSNSKFTSKNLERPSELSRESLKSKDH 475
N NS S N + SNSK +SKN S L ++ + + H
Sbjct: 80 NYSSNSNKSNNNNSNRNSNSKSSSKNSSSNSMLQQQQQQQQQH 122
>AE014296-380|AAF47587.2| 1122|Drosophila melanogaster CG1828-PA,
isoform A protein.
Length = 1122
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 356 HNSRSSKNTSYLPGSNSKFTSKNLERPSELSRESLKSKD 472
H S SS ++S+L S+SK S + PS+ S++ S+D
Sbjct: 1048 HKSNSSSSSSHLKSSSSKHGSSS--SPSKSSKDKYNSRD 1084
>AY070858-1|AAL48480.1| 94|Drosophila melanogaster GM10787p
protein.
Length = 94
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 332 NWLGTNNGHNSRSSKNTSYLPGSNSKFTSKNLERPSELSRESLKSKDH 475
N+ +N G N R+SK +LP F + RPS + K H
Sbjct: 11 NYSSSNTGRNCRNSKRYCHLPCQQLSFHQVKICRPSPQNEYENKPIKH 58
>BT030437-1|ABO52857.1| 566|Drosophila melanogaster IP18510p
protein.
Length = 566
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +2
Query: 344 TNNGHNSRSSKNTSYLPGSNSKFTSKNLERPSELSRESLKSKD 472
T+ +++RSS+ TS SNS ++ + + P++LS + +++
Sbjct: 120 TSGSNSNRSSRPTSNNSNSNSNYSPNHDQLPAQLSSRIINTRN 162
>AY051514-1|AAK92938.1| 542|Drosophila melanogaster GH16672p
protein.
Length = 542
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 152 WSEWRW-LRMKKTVYLTWEWRKTAMNWLWIRRKQGIFVRVLTRRLHTTLCPAASVQHL 322
W W L+ L +W A NW+W+ F R+L L T CP A + L
Sbjct: 394 WQSWEHGLQHFLKYLLDADWSVCAGNWMWV--SSSAFERLLDSSLVT--CPVALAKRL 447
>AF099734-1|AAC83828.1| 542|Drosophila melanogaster cryptochrome
protein.
Length = 542
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 152 WSEWRW-LRMKKTVYLTWEWRKTAMNWLWIRRKQGIFVRVLTRRLHTTLCPAASVQHL 322
W W L+ L +W A NW+W+ F R+L L T CP A + L
Sbjct: 394 WQSWEHGLQHFLKYLLDADWSVCAGNWMWV--SSSAFERLLDSSLVT--CPVALAKRL 447
>AE014298-1714|AAF48114.1| 1373|Drosophila melanogaster CG15737-PA
protein.
Length = 1373
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 157 RPAKVLRENSTSFPLSRTEKLSVKNYNT 74
+PAK L ENS+S S +S +N NT
Sbjct: 222 KPAKWLNENSSSSSSSNNNNISCRNNNT 249
>AE014297-2641|AAF55649.1| 542|Drosophila melanogaster CG3772-PA
protein.
Length = 542
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 152 WSEWRW-LRMKKTVYLTWEWRKTAMNWLWIRRKQGIFVRVLTRRLHTTLCPAASVQHL 322
W W L+ L +W A NW+W+ F R+L L T CP A + L
Sbjct: 394 WQSWEHGLQHFLKYLLDADWSVCAGNWMWV--SSSAFERLLDSSLVT--CPVALAKRL 447
>AE014297-633|AAF53999.2| 1148|Drosophila melanogaster CG34127-PA
protein.
Length = 1148
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +2
Query: 344 TNNGHNSRSSKNTSYLPGSNSKFTSKNLERPSELSRESLKSKD 472
T+ +++RSS+ TS SNS ++ + + P++LS + +++
Sbjct: 120 TSGSNSNRSSRPTSNNSNSNSNYSPNHDQLPAQLSSRIINTRN 162
>AB019389-1|BAA35000.1| 542|Drosophila melanogaster blue light
photoreceptor protein.
Length = 542
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 152 WSEWRW-LRMKKTVYLTWEWRKTAMNWLWIRRKQGIFVRVLTRRLHTTLCPAASVQHL 322
W W L+ L +W A NW+W+ F R+L L T CP A + L
Sbjct: 394 WQSWEHGLQHFLKYLLDADWSVCAGNWMWV--SSSAFERLLDSSLVT--CPVALAKRL 447
>AB018400-1|BAA33787.1| 542|Drosophila melanogaster blue-light
receptor protein.
Length = 542
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 152 WSEWRW-LRMKKTVYLTWEWRKTAMNWLWIRRKQGIFVRVLTRRLHTTLCPAASVQHL 322
W W L+ L +W A NW+W+ F R+L L T CP A + L
Sbjct: 394 WQSWEHGLQHFLKYLLDADWSVCAGNWMWV--SSSAFERLLDSSLVT--CPVALAKRL 447
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,890,554
Number of Sequences: 53049
Number of extensions: 522210
Number of successful extensions: 2573
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2555
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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