Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303G06f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   3.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   6.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   8.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 19/68 (27%), Positives = 26/68 (38%)
 Frame = -2

Query: 226 HKTSVNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAFYHTSVSILCQSKGESKKCGPGS 47
           H+      P+   S    LN+  +  KPY    F   F    V+ +   K ESKK   GS
Sbjct: 394 HQNPYLALPKTDSSDNRILNNL-LDKKPYSTYKFPTNFDALIVNEMRSEKPESKKDKKGS 452

Query: 46  YTPSKREI 23
               K  +
Sbjct: 453 QVDHKNNL 460


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 19/68 (27%), Positives = 26/68 (38%)
 Frame = -2

Query: 226 HKTSVNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAFYHTSVSILCQSKGESKKCGPGS 47
           H+      P+   S    LN+  +  KPY    F   F    V+ +   K ESKK   GS
Sbjct: 286 HQNPYLALPKTDSSDNRILNNL-LDKKPYSTYKFPTNFDALIVNEMRSEKPESKKDKKGS 344

Query: 46  YTPSKREI 23
               K  +
Sbjct: 345 QVDHKNNL 352


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 172 LNSKQIAHKPYRCGTFHNAFYH 107
           ++ +Q+ H+P     FHN + H
Sbjct: 425 MDGQQMMHRPPGDPAFHNQYAH 446


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +2

Query: 188 SLNSRAYIYTCLVQR*TTSCTLTT 259
           ++++ A+ YTCL+Q   T C + +
Sbjct: 182 NVSTDAFFYTCLIQI-ETQCEIVS 204


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 199 AGLYLHLSCAE 231
           +GL  HLSCAE
Sbjct: 580 SGLSYHLSCAE 590


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -2

Query: 235 LSLHKTSVNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAF 113
           L L +  + I  + +R+     N K+I  K      FHN F
Sbjct: 194 LGLSERQIKIWFQNRRAKERKQNKKRIEEKSQIDNLFHNGF 234


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = -2

Query: 133 GTFHNAFYHTSVSILCQSKGESKKCGPGSYTPSKREIQIAF 11
           GT   A+Y  S ++L         CG   ++ S + + + F
Sbjct: 190 GTLKTAYYLISFALLIMRLISVCLCGASVHSESSKVLPLLF 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,291
Number of Sequences: 336
Number of extensions: 2751
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)