Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303G06f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC106938-1|AAI06939.1|  576|Homo sapiens zinc finger protein 791...    30   5.7  
BC106937-1|AAI06938.1|  576|Homo sapiens zinc finger protein 791...    30   5.7  
AK074877-1|BAC11261.1|  576|Homo sapiens essor-4.  protein.            30   5.7  

>BC106938-1|AAI06939.1|  576|Homo sapiens zinc finger protein 791
           protein.
          Length = 576

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
 Frame = -2

Query: 316 SITSTGTHFVTSNSNIPHYGRQCARCCLSLHKTSVNISPRIQRSFRAPLNSKQIAHKPYR 137
           S TS  TH +T N + P+  ++C +    +  + + +  RI      P   KQ   K +R
Sbjct: 255 SHTSVLTHMITHNGDRPYKCKECGKA--FIFPSFLRVHERIHTG-EKPYKCKQCG-KAFR 310

Query: 136 CGT---FHNAFYHTSVSILCQSKGESKKCGP 53
           C T    H   +       C+  G+S    P
Sbjct: 311 CSTSIQIHERIHTGEKPYKCKECGKSFSARP 341


>BC106937-1|AAI06938.1|  576|Homo sapiens zinc finger protein 791
           protein.
          Length = 576

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
 Frame = -2

Query: 316 SITSTGTHFVTSNSNIPHYGRQCARCCLSLHKTSVNISPRIQRSFRAPLNSKQIAHKPYR 137
           S TS  TH +T N + P+  ++C +    +  + + +  RI      P   KQ   K +R
Sbjct: 255 SHTSVLTHMITHNGDRPYKCKECGKA--FIFPSFLRVHERIHTG-EKPYKCKQCG-KAFR 310

Query: 136 CGT---FHNAFYHTSVSILCQSKGESKKCGP 53
           C T    H   +       C+  G+S    P
Sbjct: 311 CSTSIQIHERIHTGEKPYKCKECGKSFSARP 341


>AK074877-1|BAC11261.1|  576|Homo sapiens essor-4.  protein.
          Length = 576

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
 Frame = -2

Query: 316 SITSTGTHFVTSNSNIPHYGRQCARCCLSLHKTSVNISPRIQRSFRAPLNSKQIAHKPYR 137
           S TS  TH +T N + P+  ++C +    +  + + +  RI      P   KQ   K +R
Sbjct: 255 SHTSVLTHMITHNGDRPYKCKECGKA--FIFPSFLRVHERIHTG-EKPYKCKQCG-KAFR 310

Query: 136 CGT---FHNAFYHTSVSILCQSKGESKKCGP 53
           C T    H   +       C+  G+S    P
Sbjct: 311 CSTSIQIHERIHTGEKPYKCKECGKSFSARP 341


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,918,797
Number of Sequences: 237096
Number of extensions: 1508484
Number of successful extensions: 3303
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3303
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)