Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303G06f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical ... 29 2.0
AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical ... 29 2.0
AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical ... 29 2.0
AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical ... 29 2.0
AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein. 29 2.0
Z99276-2|CAB16482.1| 388|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL023843-2|CAA19523.1| 388|Caenorhabditis elegans Hypothetical ... 28 4.7
>Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 214 VNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAFYHTSVSILCQS 80
+ I RI + P +S+ A KPYR N+ S+S +C S
Sbjct: 78 IQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNSISSESMSSMCTS 122
>Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 214 VNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAFYHTSVSILCQS 80
+ I RI + P +S+ A KPYR N+ S+S +C S
Sbjct: 154 IQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNSISSESMSSMCTS 198
>Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 214 VNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAFYHTSVSILCQS 80
+ I RI + P +S+ A KPYR N+ S+S +C S
Sbjct: 154 IQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNSISSESMSSMCTS 198
>Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 214 VNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAFYHTSVSILCQS 80
+ I RI + P +S+ A KPYR N+ S+S +C S
Sbjct: 154 IQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNSISSESMSSMCTS 198
>AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 214 VNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAFYHTSVSILCQS 80
+ I RI + P +S+ A KPYR N+ S+S +C S
Sbjct: 78 IQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNSISSESMSSMCTS 122
>AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 214 VNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAFYHTSVSILCQS 80
+ I RI + P +S+ A KPYR N+ S+S +C S
Sbjct: 154 IQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNSISSESMSSMCTS 198
>AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 214 VNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAFYHTSVSILCQS 80
+ I RI + P +S+ A KPYR N+ S+S +C S
Sbjct: 154 IQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNSISSESMSSMCTS 198
>AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 214 VNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAFYHTSVSILCQS 80
+ I RI + P +S+ A KPYR N+ S+S +C S
Sbjct: 154 IQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNSISSESMSSMCTS 198
>AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein.
Length = 723
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 214 VNISPRIQRSFRAPLNSKQIAHKPYRCGTFHNAFYHTSVSILCQS 80
+ I RI + P +S+ A KPYR N+ S+S +C S
Sbjct: 154 IQIPQRISSTSTVPFSSEGSAFKPYRNTHVFNSISSESMSSMCTS 198
>Z99276-2|CAB16482.1| 388|Caenorhabditis elegans Hypothetical
protein Y52D3.1a protein.
Length = 388
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 361 LTHCFL*KPYSQSFSYILTPLYNLVSLFDFVFICKEYLNY 480
L CF+ Y +S Y +TP NL SLFD VF EY+ +
Sbjct: 113 LCECFV---YERSI-YQITPAMNLGSLFDIVF---EYMKW 145
>AL023843-2|CAA19523.1| 388|Caenorhabditis elegans Hypothetical
protein Y52D3.1a protein.
Length = 388
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 361 LTHCFL*KPYSQSFSYILTPLYNLVSLFDFVFICKEYLNY 480
L CF+ Y +S Y +TP NL SLFD VF EY+ +
Sbjct: 113 LCECFV---YERSI-YQITPAMNLGSLFDIVF---EYMKW 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,931,306
Number of Sequences: 27780
Number of extensions: 248420
Number of successful extensions: 532
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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