Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303G03f
         (312 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5EBJ6 Cluster: Putative uncharacterized protein; n=2; ...    33   1.6  
UniRef50_A4YMR1 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  
UniRef50_Q2FMN4 Cluster: Pyruvate kinase; n=1; Methanospirillum ...    30   8.7  
UniRef50_Q18KS6 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  

>UniRef50_A5EBJ6 Cluster: Putative uncharacterized protein; n=2;
           Bradyrhizobium|Rep: Putative uncharacterized protein -
           Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
          Length = 491

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 177 PLSQGTWMQCIAAVSCTRIATKLDDAP 97
           P++ G W  C+AA SC  IA   DD P
Sbjct: 304 PVTVGEWKACVAAGSCADIAAGSDDQP 330


>UniRef50_A4YMR1 Cluster: Putative uncharacterized protein; n=1;
           Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
           protein - Bradyrhizobium sp. (strain ORS278)
          Length = 549

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 177 PLSQGTWMQCIAAVSCTRIATKLDDAP 97
           P++ G W +C+A  +CT + +  DD P
Sbjct: 365 PVTLGEWKECVADKACTDVTSGPDDNP 391


>UniRef50_Q2FMN4 Cluster: Pyruvate kinase; n=1; Methanospirillum
           hungatei JF-1|Rep: Pyruvate kinase - Methanospirillum
           hungatei (strain JF-1 / DSM 864)
          Length = 500

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = -2

Query: 107 MTRRGIGN*LVVKVLNCRRITRG-EDVIKH 21
           +TR G+GN  ++  + CRR   G +D+I+H
Sbjct: 233 LTREGMGNIPLIAKIECRRAVEGLDDIIRH 262


>UniRef50_Q18KS6 Cluster: Putative uncharacterized protein; n=1;
           Haloquadratum walsbyi DSM 16790|Rep: Putative
           uncharacterized protein - Haloquadratum walsbyi (strain
           DSM 16790)
          Length = 195

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 144 RYTASKYLVTTASYMVILYIIHVIVIS 224
           R+TAS  L+ TA  + +L+IIH  +I+
Sbjct: 151 RWTASVTLIVTAGELAVLFIIHTYIIA 177


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,141,729
Number of Sequences: 1657284
Number of extensions: 5978898
Number of successful extensions: 11502
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11502
length of database: 575,637,011
effective HSP length: 80
effective length of database: 443,054,291
effective search space used: 10190248693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)