Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303G03f
         (312 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    22   4.6  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    22   4.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    22   6.1  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          21   8.1  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          21   8.1  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 40  PRVILRQFSTFTTSQLPIPRRVIQFSRDSRTTHRG 144
           P V+ R F+   T+Q P P    Q    + + HRG
Sbjct: 139 PSVLRRNFA-LKTAQTPDPSFQSQLMNQTSSFHRG 172


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 40  PRVILRQFSTFTTSQLPIPRRVIQFSRDSRTTHRG 144
           P V+ R F+   T+Q P P    Q    + + HRG
Sbjct: 144 PSVLRRNFA-LKTAQTPDPSFQSQLMNQTSSFHRG 177


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 152 CIQVPCDNGVLYGYPVHNP 208
           C++V C+N  LY   V+ P
Sbjct: 173 CVRVACNNAHLYVMVVYIP 191


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 141 AVSCTRIATKLDDAP 97
           A+SC  +A+K+++AP
Sbjct: 124 AMSCICLASKIEEAP 138


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 141 AVSCTRIATKLDDAP 97
           A+SC  +A+K+++AP
Sbjct: 124 AMSCICLASKIEEAP 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,957
Number of Sequences: 2352
Number of extensions: 6671
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 20316549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)