Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303G03f
(312 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008651-1|AAH08651.1| 76|Homo sapiens MGC9913 protein protein. 29 2.2
BC043916-1|AAH43916.1| 767|Homo sapiens OBSCN protein protein. 28 6.7
BC007719-1|AAH07719.1| 349|Homo sapiens hypoxia-inducible facto... 28 6.7
AL670729-3|CAH71673.1| 6620|Homo sapiens obscurin, cytoskeletal ... 28 6.7
AL359510-13|CAI15072.1| 6620|Homo sapiens obscurin, cytoskeletal... 28 6.7
AL353593-3|CAI19285.1| 6620|Homo sapiens obscurin, cytoskeletal ... 28 6.7
AL353593-1|CAI19283.1| 709|Homo sapiens obscurin, cytoskeletal ... 28 6.7
AL133352-6|CAH73566.1| 349|Homo sapiens hypoxia-inducible facto... 28 6.7
AK000622-1|BAA91291.1| 349|Homo sapiens protein ( Homo sapiens ... 28 6.7
AJ314904-1|CAC85751.1| 658|Homo sapiens obscurin protein. 28 6.7
AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein. 28 6.7
AF395830-1|AAL27308.1| 349|Homo sapiens factor inhibiting HIF1 ... 28 6.7
AK130055-1|BAC85287.1| 170|Homo sapiens protein ( Homo sapiens ... 27 8.8
>BC008651-1|AAH08651.1| 76|Homo sapiens MGC9913 protein protein.
Length = 76
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = -1
Query: 159 WMQ---CIAAVSCTRIATKLDDAPGNWQLTC 76
W Q CI CT + T DDA +W L C
Sbjct: 42 WFQPYFCILKTLCTTLDTVQDDATSSWMLIC 72
>BC043916-1|AAH43916.1| 767|Homo sapiens OBSCN protein protein.
Length = 767
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 150 TASKYLVTTASYMVILYIIHVIVISPLPPWFMC*XSV 260
T++++ V S ++ + V V+ P P WF C S+
Sbjct: 125 TSAQFFVEEQSITIVRGLQDVTVMEPAPAWFECETSI 161
>BC007719-1|AAH07719.1| 349|Homo sapiens hypoxia-inducible factor
1, alpha subunit inhibitor protein.
Length = 349
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 131 QLTAAIHCIQVPCDN-GVLYGYPVHNPC 211
Q+ CI P D LY YPVH+PC
Sbjct: 209 QIKGYKRCILFPPDQFECLYPYPVHHPC 236
>AL670729-3|CAH71673.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 150 TASKYLVTTASYMVILYIIHVIVISPLPPWFMC*XSV 260
T++++ V S ++ + V V+ P P WF C S+
Sbjct: 2368 TSAQFFVEEQSITIVRGLQDVTVMEPAPAWFECETSI 2404
>AL359510-13|CAI15072.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 150 TASKYLVTTASYMVILYIIHVIVISPLPPWFMC*XSV 260
T++++ V S ++ + V V+ P P WF C S+
Sbjct: 2368 TSAQFFVEEQSITIVRGLQDVTVMEPAPAWFECETSI 2404
>AL353593-3|CAI19285.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 150 TASKYLVTTASYMVILYIIHVIVISPLPPWFMC*XSV 260
T++++ V S ++ + V V+ P P WF C S+
Sbjct: 2368 TSAQFFVEEQSITIVRGLQDVTVMEPAPAWFECETSI 2404
>AL353593-1|CAI19283.1| 709|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 709
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 150 TASKYLVTTASYMVILYIIHVIVISPLPPWFMC*XSV 260
T++++ V S ++ + V V+ P P WF C S+
Sbjct: 67 TSAQFFVEEQSITIVRGLQDVTVMEPAPAWFECETSI 103
>AL133352-6|CAH73566.1| 349|Homo sapiens hypoxia-inducible factor
1, alpha subunit inhibitor protein.
Length = 349
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 131 QLTAAIHCIQVPCDN-GVLYGYPVHNPC 211
Q+ CI P D LY YPVH+PC
Sbjct: 209 QIKGYKRCILFPPDQFECLYPYPVHHPC 236
>AK000622-1|BAA91291.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ20615 fis, clone KAT05373. ).
Length = 349
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 131 QLTAAIHCIQVPCDN-GVLYGYPVHNPC 211
Q+ CI P D LY YPVH+PC
Sbjct: 209 QIKGYKRCILFPPDQFECLYPYPVHHPC 236
>AJ314904-1|CAC85751.1| 658|Homo sapiens obscurin protein.
Length = 658
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 150 TASKYLVTTASYMVILYIIHVIVISPLPPWFMC*XSV 260
T++++ V S ++ + V V+ P P WF C S+
Sbjct: 294 TSAQFFVEEQSITIVRGLQDVTVMEPAPAWFECETSI 330
>AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.
Length = 6620
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 150 TASKYLVTTASYMVILYIIHVIVISPLPPWFMC*XSV 260
T++++ V S ++ + V V+ P P WF C S+
Sbjct: 2368 TSAQFFVEEQSITIVRGLQDVTVMEPAPAWFECETSI 2404
>AF395830-1|AAL27308.1| 349|Homo sapiens factor inhibiting HIF1
protein.
Length = 349
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 131 QLTAAIHCIQVPCDN-GVLYGYPVHNPC 211
Q+ CI P D LY YPVH+PC
Sbjct: 209 QIKGYKRCILFPPDQFECLYPYPVHHPC 236
>AK130055-1|BAC85287.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ26545 fis, clone LNF00165. ).
Length = 170
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 40 PRVILRQFSTFTTSQLPIPRRVIQF 114
PR + RQ ST S LP+PR + F
Sbjct: 145 PRTVCRQISTQHPSWLPVPRTLYLF 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,373,761
Number of Sequences: 237096
Number of extensions: 878034
Number of successful extensions: 1408
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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