Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303G03f
         (312 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41991-5|AAA83345.3|  345|Caenorhabditis elegans Seven tm recept...    29   0.52 
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr...    27   3.6  
Z81568-9|CAB04599.2|  386|Caenorhabditis elegans Hypothetical pr...    26   4.8  
Z81540-11|CAB04397.2|  191|Caenorhabditis elegans Hypothetical p...    26   6.4  
AC024882-3|AAF60934.1|  340|Caenorhabditis elegans Seven tm rece...    26   6.4  
U41991-3|AAA83343.2|  350|Caenorhabditis elegans Seven tm recept...    25   8.4  
AC006603-6|ABB51200.1|  534|Caenorhabditis elegans Hypothetical ...    25   8.4  

>U41991-5|AAA83345.3|  345|Caenorhabditis elegans Seven tm receptor
           protein 1 protein.
          Length = 345

 Score = 29.5 bits (63), Expect = 0.52
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 129 YNSPRRYTASKYLVTTASYMVILYIIHVIVISP 227
           Y SP  + A KYL+T  S   ++Y +  +++SP
Sbjct: 32  YKSPSSFGAYKYLLTYISIFELVYAVLDVLVSP 64


>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical
           protein ZK270.2e protein.
          Length = 4541

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 61  FSTFTTSQL--PIPRRVIQFSRDSRTTHRGDTLHPST 165
           F T  TSQ     P    QF+ +   THR D L PST
Sbjct: 838 FFTKKTSQTLSGYPESTSQFTGELDATHRDDDLEPST 874


>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical
           protein ZK270.2d protein.
          Length = 4648

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 61  FSTFTTSQL--PIPRRVIQFSRDSRTTHRGDTLHPST 165
           F T  TSQ     P    QF+ +   THR D L PST
Sbjct: 827 FFTKKTSQTLSGYPESTSQFTGELDATHRDDDLEPST 863


>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical
           protein ZK270.2a protein.
          Length = 4530

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 61  FSTFTTSQL--PIPRRVIQFSRDSRTTHRGDTLHPST 165
           F T  TSQ     P    QF+ +   THR D L PST
Sbjct: 827 FFTKKTSQTLSGYPESTSQFTGELDATHRDDDLEPST 863


>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical
           protein ZK270.2e protein.
          Length = 4541

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 61  FSTFTTSQL--PIPRRVIQFSRDSRTTHRGDTLHPST 165
           F T  TSQ     P    QF+ +   THR D L PST
Sbjct: 838 FFTKKTSQTLSGYPESTSQFTGELDATHRDDDLEPST 874


>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical
           protein ZK270.2d protein.
          Length = 4648

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 61  FSTFTTSQL--PIPRRVIQFSRDSRTTHRGDTLHPST 165
           F T  TSQ     P    QF+ +   THR D L PST
Sbjct: 827 FFTKKTSQTLSGYPESTSQFTGELDATHRDDDLEPST 863


>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical
           protein ZK270.2a protein.
          Length = 4530

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +1

Query: 61  FSTFTTSQL--PIPRRVIQFSRDSRTTHRGDTLHPST 165
           F T  TSQ     P    QF+ +   THR D L PST
Sbjct: 827 FFTKKTSQTLSGYPESTSQFTGELDATHRDDDLEPST 863


>Z81568-9|CAB04599.2|  386|Caenorhabditis elegans Hypothetical
           protein K08E3.7 protein.
          Length = 386

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
 Frame = -1

Query: 138 VSCTRIATKLDDAPGNWQLT-CCKSAKLSENYAGRGCN 28
           ++C   A  L    GNWQ+T CC      +     GCN
Sbjct: 170 LACNDPAAALTHVRGNWQMTECCVCDGKEKVIFDLGCN 207


>Z81540-11|CAB04397.2|  191|Caenorhabditis elegans Hypothetical
           protein F46B3.14 protein.
          Length = 191

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 152 CIQVPCDNGVLYGYPVHNPC 211
           C QV C  G  YG P+ NPC
Sbjct: 142 CSQVKCAIGSRYGIPI-NPC 160


>AC024882-3|AAF60934.1|  340|Caenorhabditis elegans Seven tm
           receptor protein 155 protein.
          Length = 340

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 132 NSPRRYTASKYLVTTASYMVILYIIHVIVISP 227
           NSPR+  + KYL+   S + I+Y  +  V +P
Sbjct: 33  NSPRKMGSYKYLLIYFSALTIVYAANDFVSAP 64


>U41991-3|AAA83343.2|  350|Caenorhabditis elegans Seven tm receptor
           protein 220 protein.
          Length = 350

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 135 SPRRYTASKYLVTTASYMVILYIIHVIVISPLPPWFMC*XSVRVTT 272
           SPR+    KYL+   S   ILY +  + ++P+   +     V +TT
Sbjct: 37  SPRQLGVYKYLMVFISIFEILYSLLEVTLTPIHYSYRSSVVVLITT 82


>AC006603-6|ABB51200.1|  534|Caenorhabditis elegans Hypothetical
           protein B0524.1 protein.
          Length = 534

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -1

Query: 120 ATKLDDAPGNWQLT 79
           A KLD+ PGNW+++
Sbjct: 143 AKKLDEMPGNWRIS 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,394,045
Number of Sequences: 27780
Number of extensions: 144220
Number of successful extensions: 327
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)