Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303G02f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O04611 Cluster: A_IG002N01.8 protein; n=16; Magnoliophy...    33   5.2  
UniRef50_UPI000023DD8D Cluster: hypothetical protein FG06933.1; ...    32   6.9  
UniRef50_Q95PH3 Cluster: Histidine kinase DhkE; n=2; Dictyosteli...    32   9.2  
UniRef50_Q03633 Cluster: Asparagine-rich antigen 55-6; n=2; Plas...    32   9.2  

>UniRef50_O04611 Cluster: A_IG002N01.8 protein; n=16;
           Magnoliophyta|Rep: A_IG002N01.8 protein - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 444

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 121 LMKVIDNSHRRPPPGKEIRGFVCKFKI 201
           ++K +D+SH  PPPGK+ R ++C   I
Sbjct: 302 MIKPLDHSHDLPPPGKKGRTYICSCMI 328


>UniRef50_UPI000023DD8D Cluster: hypothetical protein FG06933.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG06933.1 - Gibberella zeae PH-1
          Length = 1022

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -3

Query: 375 EGKELSFRMFVYRSNKQSSPHTHTNQTLE--YRILF 274
           EGK+L    + YRSN  + PH +  Q+LE  ++ LF
Sbjct: 358 EGKDLDTVYYFYRSNATADPHPNAKQSLESKFKTLF 393


>UniRef50_Q95PH3 Cluster: Histidine kinase DhkE; n=2; Dictyostelium
           discoideum|Rep: Histidine kinase DhkE - Dictyostelium
           discoideum (Slime mold)
          Length = 1699

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 21/56 (37%), Positives = 31/56 (55%)
 Frame = -3

Query: 519 NVIKTKISVIFLNIVKIIVLVSVGLYITIIVL*HSCYKIIYRLDDIDTEGKELSFR 352
           N+I   IS+  LN  K+IV  ++ + IT+  L  S Y  I  +D+ + E KE  FR
Sbjct: 274 NIIIHLISIYSLNTKKLIVFQNLIVPITVSFL-LSFYSYILSIDNQEIEAKEKRFR 328


>UniRef50_Q03633 Cluster: Asparagine-rich antigen 55-6; n=2;
           Plasmodium falciparum|Rep: Asparagine-rich antigen 55-6
           - Plasmodium falciparum
          Length = 480

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = -3

Query: 465 VLVSVGLYITIIVL*HSCYKIIYRLDDIDTEGKELSFRMFVYRSNKQSSPH 313
           +L S+ +YIT I++  SC+  +Y++ D + + K      F+Y   +   P+
Sbjct: 146 MLKSIDIYITEIIM-KSCFVTVYKMKDDELKWKRADIEGFLYIVKRSIKPY 195


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,102,414
Number of Sequences: 1657284
Number of extensions: 9301924
Number of successful extensions: 18332
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18328
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)