Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303F12f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81587-7|CAB04707.1| 185|Caenorhabditis elegans Hypothetical pr... 88 4e-18
Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical pr... 31 0.50
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 31 0.50
AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical ... 30 1.2
AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical ... 30 1.2
Z69716-3|CAA93529.1| 335|Caenorhabditis elegans Hypothetical pr... 29 1.5
U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclas... 29 2.0
AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical ... 29 2.0
U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 28 3.5
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 28 3.5
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc... 28 3.5
Z81091-4|CAD56588.1| 287|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 28 4.7
Z82068-3|CAB04900.2| 1071|Caenorhabditis elegans Hypothetical pr... 27 6.2
U61946-8|AAC24392.1| 185|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 27 6.2
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 27 6.2
AF003142-2|AAB54190.1| 412|Caenorhabditis elegans Hypothetical ... 27 6.2
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 27 8.1
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 27 8.1
>Z81587-7|CAB04707.1| 185|Caenorhabditis elegans Hypothetical
protein T06G6.9 protein.
Length = 185
Score = 87.8 bits (208), Expect = 4e-18
Identities = 45/119 (37%), Positives = 77/119 (64%), Gaps = 4/119 (3%)
Frame = +1
Query: 175 SYSGIPEAEFVDNVDEFM-KSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQI 351
S GIP++E +++V+ ++ K ++ E +VVL+ EK+ KYK +E ++ ++ R+ ++I
Sbjct: 9 SARGIPKSELIEDVESWLTKEKLSIEEAEVVLR---EKYGKYKYVESSMLAQKVRMSEKI 65
Query: 352 PDLARTIEVIEKLKEQK---EEVETQFLLSDQVFVKANVPPTKSVCLWLGANVMLEYSL 519
P+ ++ +I+ L ++ E ET FLLSD V+ KA V + V +WLGANVM+EY L
Sbjct: 66 PEFENSLSIIDTLIAKRAADESFETTFLLSDDVYTKATVQKPEKVSIWLGANVMVEYDL 124
>Z68319-3|CAA92701.1| 339|Caenorhabditis elegans Hypothetical
protein T23G7.3 protein.
Length = 339
Score = 31.1 bits (67), Expect = 0.50
Identities = 17/59 (28%), Positives = 33/59 (55%)
Frame = +1
Query: 277 DEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKA 453
+E+ + K +R+RLR++ D T+E +E + E K+EV+ + + D+ F +A
Sbjct: 235 EEESDEEKARRKAEKKERKRLRREQRDKEETLETVETILEVKQEVKEEII--DEEFDEA 291
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 31.1 bits (67), Expect = 0.50
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 247 EGVDVVLKSLDEKHRKYKVMEYT-LATKRRRLRQQIPDLARTIEVIEKLKEQKE 405
E +D K +++ ++ K E + K + R++ AR +E +EKLKEQK+
Sbjct: 127 EEIDADYKIIEDAEKRKKEQEKREIENKIKEARKKREQEARRLEEVEKLKEQKK 180
>AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical
protein W05F2.6 protein.
Length = 456
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 292 KYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQ 420
K K + + L T ++L++ LAR EKLKE++ +++TQ
Sbjct: 238 KLKFLAFPLTTGFKKLQKLQDPLARIKLATEKLKERRAQLDTQ 280
>AC024787-1|AAF60607.2| 469|Caenorhabditis elegans Hypothetical
protein Y46C8AR.1 protein.
Length = 469
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -1
Query: 230 FINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIYCEVYIQFLEN 99
F + S S+ +S +P+Y LGFE +T ++F EV +F +N
Sbjct: 228 FSDYSLFSSYVSSHLPDYTLGFEEATTGSNVF---EVINKFYDN 268
>Z69716-3|CAA93529.1| 335|Caenorhabditis elegans Hypothetical
protein C04B4.3 protein.
Length = 335
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +1
Query: 289 RKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKANVPPT 468
RK +E L +K+ L+ + + + K ++ E + + + D+VF+K N+
Sbjct: 220 RKINPLENQLESKKSFLQTKYSKFLTKLNKVHK--KEAEFIASIWSKDDEVFLKGNLVWG 277
Query: 469 KSVCLWLGANVMLEY 513
K L G+N+ EY
Sbjct: 278 KQTSLVPGSNIWKEY 292
>U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclase
protein 15 protein.
Length = 1000
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 KYKVMEYTLATKRRRLRQQIPDLARTIEVIEK-LKEQKEEVETQFLLSDQVFVKANVPPT 468
K K+ T+ KR + + + + + +EK + E+ EE+E + S+ + +K +P
Sbjct: 701 KRKLKPLTIGLKRTIMDNMVSMIEKYTDKLEKDIAERNEELEAEKAKSEAL-LKMMLPEV 759
Query: 469 KSVCLWLGANVMLE 510
+ L LG+NV E
Sbjct: 760 VADSLKLGSNVSAE 773
>AL021492-4|CAA16384.1| 492|Caenorhabditis elegans Hypothetical
protein Y45F10D.9 protein.
Length = 492
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 310 YTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFL-LSDQV 441
Y A + LRQ+ DL + +E + +KE+ EE+ +F L D+V
Sbjct: 191 YKSADELASLRQKCGDLEKQVEKLSGVKEEFEEMSEKFKELEDEV 235
>U21317-4|AAA62523.1| 719|Caenorhabditis elegans Hypothetical
protein B0495.2 protein.
Length = 719
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 160 PSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDE 282
P+ PK YS D+ D KSP AE D V++ LD+
Sbjct: 246 PAGPKKYSKFESDPESDHDDTKPKSPGKAEDDDDVIEVLDD 286
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 274 LDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKA 453
++EK + + E + KRR +++ + +E E+ +E +E+ E Q S + FVKA
Sbjct: 130 VEEKSEESEEEEEKIKKKRRGKKEKKEKVVEEVEEEEEHEETEEQEEEQ---SGEKFVKA 186
Query: 454 N 456
N
Sbjct: 187 N 187
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 28.3 bits (60), Expect = 3.5
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 274 LDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQVFVKA 453
++EK + + E + KRR +++ + +E E+ +E +E+ E Q S + FVKA
Sbjct: 130 VEEKSEESEEEEEKIKKKRRGKKEKKEKVVEEVEEEEEHEETEEQEEEQ---SGEKFVKA 186
Query: 454 N 456
N
Sbjct: 187 N 187
>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl
cyclase protein 21 protein.
Length = 1119
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 KYKVMEYTLATKRRRLRQQIPDLARTIEVIEK-LKEQKEEVETQFLLSDQVFVKANVPPT 468
K K+ T+ KR + + + + + +EK + E+ EE+E + S+ + +K +P
Sbjct: 762 KRKLKPLTIGLKRTIMDNMVSMIEKYTDKLEKDIAERNEELEGEKAKSEAL-LKMMLPEV 820
Query: 469 KSVCLWLGANVMLE 510
+ L LG+NV E
Sbjct: 821 VADSLKLGSNVSAE 834
>Z81091-4|CAD56588.1| 287|Caenorhabditis elegans Hypothetical
protein F55H12.5 protein.
Length = 287
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = -1
Query: 281 SSRLFKTTSTPSALIGDFINSSTLSTNSASGIPEYDLGFEGSTPSPSIFIY 129
S+R KTT DFINS T S + +G+ E+ E SP+ F Y
Sbjct: 25 STRKKKTTMLSPKKFCDFINSKTNSKSFEAGVAEFYK--ETYLESPTFFNY 73
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 289 RKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQ 420
RK++ + + + R ++QI D AR IE+ + QK+++++Q
Sbjct: 326 RKWEEYQKKIREEDDREKRQIQDKARAIELRNQQVYQKQQIQSQ 369
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 289 RKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQ 420
RK++ + + + R ++QI D AR IE+ + QK+++++Q
Sbjct: 326 RKWEEYQKKIREEDDREKRQIQDKARAIELRNQQVYQKQQIQSQ 369
>Z82068-3|CAB04900.2| 1071|Caenorhabditis elegans Hypothetical protein
W04A4.5 protein.
Length = 1071
Score = 27.5 bits (58), Expect = 6.2
Identities = 29/108 (26%), Positives = 40/108 (37%), Gaps = 1/108 (0%)
Frame = -1
Query: 422 NCVSTSSFCSFNFSITSIVRAKSGICCRNRLLLVANVYSITLYLRCFSSRLFKTTSTPSA 243
N +T+ N I R S I N V+ + L SS + T+T
Sbjct: 739 NVTATAQLVDRNIQRDEIFRDTSAISLYNSS--VSGAARLIFCLGEVSSHVDSITNTVLR 796
Query: 242 LIGDFINSSTLSTNSASGIPEYDLGFEG-STPSPSIFIYCEVYIQFLE 102
G+ N L S + + F G S S IYC VY+ FL+
Sbjct: 797 G-GELTNVKQLIGQSIEDMQSIEHQFSGISMQIHSYLIYCRVYLSFLD 843
>U61946-8|AAC24392.1| 185|Caenorhabditis elegans Hypothetical
protein F47C12.7 protein.
Length = 185
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 116 IQFLENDSKLI*NLNDILEFD*FC 45
I +E DSKL NDIL+FD FC
Sbjct: 23 IYIIEEDSKL--GKNDILKFDRFC 44
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 181 SGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHR-KYKVMEYTLATKRRRLRQQIPD 357
+G AE + K P+N +D VLKS + + K E + + ++ P+
Sbjct: 887 NGSETAEIAEKAQISEKKPVNRLVIDEVLKSPQKSEKIPEKAQEIEEIEESPKKSEKAPE 946
Query: 358 LARTIEVIEKLKEQKEE 408
+ I+ I K E+ E
Sbjct: 947 KPQEIQEIPKKSEKAPE 963
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 181 SGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHR-KYKVMEYTLATKRRRLRQQIPD 357
+G AE + K P+N +D VLKS + + K E + + ++ P+
Sbjct: 885 NGSETAEIAEKAQISEKKPVNRLVIDEVLKSPQKSEKIPEKAQEIEEIEESPKKSEKAPE 944
Query: 358 LARTIEVIEKLKEQKEE 408
+ I+ I K E+ E
Sbjct: 945 KPQEIQEIPKKSEKAPE 961
>AF003142-2|AAB54190.1| 412|Caenorhabditis elegans Hypothetical
protein F57C9.7 protein.
Length = 412
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 142 EGDGVEPSNPKSYSGIPEAEFVDNVDEFMKSPINAEGVD 258
E GV + P+ S IPE E V++ E P +A+G D
Sbjct: 15 ESSGV--NQPEKKSRIPETEIVEDPLEIEVPPASADGTD 51
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical
protein T06E4.3b protein.
Length = 2514
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 371 IVRAKSGICCRNRLLLVANVYSITLYLRCFSSRLFKTTSTPSA 243
+++A G C L ++ YS T++ RCF +RLF S+ A
Sbjct: 795 LIKAPVGTC-EEALQIMFKRYS-TIFTRCFLNRLFFDASSAGA 835
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical
protein T06E4.3a protein.
Length = 2531
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 371 IVRAKSGICCRNRLLLVANVYSITLYLRCFSSRLFKTTSTPSA 243
+++A G C L ++ YS T++ RCF +RLF S+ A
Sbjct: 795 LIKAPVGTC-EEALQIMFKRYS-TIFTRCFLNRLFFDASSAGA 835
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 316 LATKRRRLRQQIPDLARTIEVIEKLKEQKEEVE 414
+AT + + +P L + +EV++K K KEE++
Sbjct: 272 IATHGTKTQPIVPKLDKLVEVLKKSKLSKEEID 304
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 371 IVRAKSGICCRNRLLLVANVYSITLYLRCFSSRLFKTTSTPSA 243
+++A G C L ++ YS T++ RCF +RLF S+ A
Sbjct: 795 LIKAPVGTC-EEALQIMFKRYS-TIFTRCFLNRLFFDASSAGA 835
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,282,757
Number of Sequences: 27780
Number of extensions: 188880
Number of successful extensions: 761
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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