Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303F11f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5ZCT8 Cluster: Putative uncharacterized protein; n=3; ...    33   3.0  
UniRef50_A3YAW7 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_UPI00006CB795 Cluster: hypothetical protein TTHERM_0034...    32   9.2  
UniRef50_UPI000057C40A Cluster: hypothetical protein MS53_0454; ...    32   9.2  
UniRef50_Q036S9 Cluster: ADP-glucose pyrophosphorylase; n=1; Lac...    32   9.2  

>UniRef50_A5ZCT8 Cluster: Putative uncharacterized protein; n=3;
           Bacteroidales|Rep: Putative uncharacterized protein -
           Bacteroides caccae ATCC 43185
          Length = 450

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = -1

Query: 503 IFLFINSKLFNISNGL*IIIRNTQDHKIILFQTKILRPRYHHYEHCFILSSYSE*NTC 330
           +  F  +K+   S G  +I RN +D   I++     R  Y +Y+H  I  +Y   N C
Sbjct: 217 VLSFNGNKMITTSGGGALICRNAEDANTIMWYATQARDAYPYYQHTAIGFNYRMSNVC 274


>UniRef50_A3YAW7 Cluster: Putative uncharacterized protein; n=1;
           Marinomonas sp. MED121|Rep: Putative uncharacterized
           protein - Marinomonas sp. MED121
          Length = 394

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -3

Query: 417 FIPNKNTQAQVPPLRTLLYTFKLFRIKHMRTCLKLRKFNEEQLTSRI 277
           +  NKN   +VP  R L++  K ++ KHM   ++LR    E+L+S +
Sbjct: 307 YYENKNYDCEVPKKRALVFVSKSYKEKHMFLDIELRGKALEKLSSTL 353


>UniRef50_UPI00006CB795 Cluster: hypothetical protein
           TTHERM_00348920; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00348920 - Tetrahymena
           thermophila SB210
          Length = 1175

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +1

Query: 37  FIKP*IKYNNKNCD*TQHSNTNIHN*YVRNNN 132
           ++KP ++Y    C  TQ+S+ NI+N YV+ NN
Sbjct: 496 YVKPMLQYQADICWQTQYSSFNINNNYVKINN 527


>UniRef50_UPI000057C40A Cluster: hypothetical protein MS53_0454;
           n=1; Mycoplasma synoviae 53|Rep: hypothetical protein
           MS53_0454 - Mycoplasma synoviae 53
          Length = 208

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
 Frame = -2

Query: 136 SYYCFSHINCVCW----C-WNVEFNHNFYCCI*F 50
           S YCFS  +C CW    C +N  FN+ F+CC  F
Sbjct: 91  SSYCFSS-SCFCWFSFSCRFNFFFNYCFFCCFYF 123


>UniRef50_Q036S9 Cluster: ADP-glucose pyrophosphorylase; n=1;
           Lactobacillus casei ATCC 334|Rep: ADP-glucose
           pyrophosphorylase - Lactobacillus casei (strain ATCC
           334)
          Length = 389

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 272 YKILDVNCSSLNFLNLRQVRMCFILNSLKV*SNVRSGGTW 391
           Y+++D   SSL+  N+R V +    +   V  ++RSG TW
Sbjct: 37  YRLIDFPLSSLDHANVRSVAIFLPKSGRSVTDHIRSGSTW 76


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 418,752,554
Number of Sequences: 1657284
Number of extensions: 7221611
Number of successful extensions: 23363
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22693
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)