Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303F11f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81114-4|CAB03288.2|  688|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AY652944-1|AAT73711.1|  688|Caenorhabditis elegans guanylate cyc...    29   1.5  
Z92812-5|CAB07279.1|  326|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z66494-6|CAE48497.1|  423|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z66494-5|CAA91259.1|  473|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z81114-4|CAB03288.2|  688|Caenorhabditis elegans Hypothetical
           protein T04D3.4 protein.
          Length = 688

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 17/61 (27%), Positives = 34/61 (55%)
 Frame = -3

Query: 456 MNNYQEHTGSQDNFIPNKNTQAQVPPLRTLLYTFKLFRIKHMRTCLKLRKFNEEQLTSRI 277
           +++ Q H G++D  + N++  +QV   RTL  T K  ++K M   L++ K   ++L   +
Sbjct: 343 LSDMQRHDGTRDVIMLNQSRMSQVELNRTLEETTK--KLKKMAQELEIEKQKTDELLCEL 400

Query: 276 L 274
           +
Sbjct: 401 M 401


>AY652944-1|AAT73711.1|  688|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 688

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 17/61 (27%), Positives = 34/61 (55%)
 Frame = -3

Query: 456 MNNYQEHTGSQDNFIPNKNTQAQVPPLRTLLYTFKLFRIKHMRTCLKLRKFNEEQLTSRI 277
           +++ Q H G++D  + N++  +QV   RTL  T K  ++K M   L++ K   ++L   +
Sbjct: 343 LSDMQRHDGTRDVIMLNQSRMSQVELNRTLEETTK--KLKKMAQELEIEKQKTDELLCEL 400

Query: 276 L 274
           +
Sbjct: 401 M 401


>Z92812-5|CAB07279.1|  326|Caenorhabditis elegans Hypothetical
           protein T03E6.5 protein.
          Length = 326

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +1

Query: 430 SCVFLIIIHKPFEMLNNFELMNK-KMTWNV 516
           S V +I++HKP+ ++ NF++  K ++ W V
Sbjct: 279 STVVMIMVHKPYRIVVNFKIYRKLQILWGV 308


>Z66494-6|CAE48497.1|  423|Caenorhabditis elegans Hypothetical
           protein C34C6.5b protein.
          Length = 423

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 382 TTTNIALYFQAIQNKTHANLP 320
           T  NIA Y  AI+++TH +LP
Sbjct: 354 TRVNIAKYLLAIEHETHLDLP 374


>Z66494-5|CAA91259.1|  473|Caenorhabditis elegans Hypothetical
           protein C34C6.5a protein.
          Length = 473

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 382 TTTNIALYFQAIQNKTHANLP 320
           T  NIA Y  AI+++TH +LP
Sbjct: 404 TRVNIAKYLLAIEHETHLDLP 424


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,094,979
Number of Sequences: 27780
Number of extensions: 181807
Number of successful extensions: 324
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)