Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303F10f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH0645... 141 5e-34
AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-P... 141 5e-34
AY089487-1|AAL90225.1| 293|Drosophila melanogaster AT31162p pro... 31 1.3
AE014297-1179|AAF54542.1| 293|Drosophila melanogaster CG4073-PA... 31 1.3
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 28 6.7
BT025108-1|ABE73279.1| 338|Drosophila melanogaster IP10719p pro... 28 6.7
AE014296-2246|AAF49840.1| 338|Drosophila melanogaster CG11251-P... 28 6.7
AY089248-1|AAL89986.1| 742|Drosophila melanogaster AT03371p pro... 28 8.8
AE014296-1169|AAF50630.1| 742|Drosophila melanogaster CG10064-P... 28 8.8
>AF181634-1|AAD55420.1| 558|Drosophila melanogaster BcDNA.GH06451
protein.
Length = 558
Score = 141 bits (342), Expect = 5e-34
Identities = 71/143 (49%), Positives = 92/143 (64%), Gaps = 2/143 (1%)
Frame = +1
Query: 97 VGNLSLSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYVDSKDDT--KDY 270
+ L+L I+TS KPFKTIL+AM HAGKEPFPTIYVD+KD + Y
Sbjct: 6 LAELTLGAIFTSEKKGSDESGDGSESKPFKTILQAMRHAGKEPFPTIYVDTKDPNAAEPY 65
Query: 271 DVAAKSQLKKIQKIWVRENYKAMDXXXXXXXXXXXRSQNLDEAKKILLQEDPSLPKATVV 450
+ AAKSQLKKIQK++VRE++K D R QNL++A+K+ + EDPSLP A +
Sbjct: 66 EPAAKSQLKKIQKLFVRESHKNADKLQREAEDAEKRQQNLEDARKVKISEDPSLPVARKI 125
Query: 451 KICETTEHRGQRICIRGWVHRLR 519
+I E T +R R+ + GWVHRLR
Sbjct: 126 RIYEGTANRDSRVKVYGWVHRLR 148
>AE014134-3050|AAF53768.1| 558|Drosophila melanogaster CG10687-PA
protein.
Length = 558
Score = 141 bits (342), Expect = 5e-34
Identities = 71/143 (49%), Positives = 92/143 (64%), Gaps = 2/143 (1%)
Frame = +1
Query: 97 VGNLSLSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYVDSKDDT--KDY 270
+ L+L I+TS KPFKTIL+AM HAGKEPFPTIYVD+KD + Y
Sbjct: 6 LAELTLGAIFTSEKKGSDESGDGSESKPFKTILQAMRHAGKEPFPTIYVDTKDPNAAEPY 65
Query: 271 DVAAKSQLKKIQKIWVRENYKAMDXXXXXXXXXXXRSQNLDEAKKILLQEDPSLPKATVV 450
+ AAKSQLKKIQK++VRE++K D R QNL++A+K+ + EDPSLP A +
Sbjct: 66 EPAAKSQLKKIQKLFVRESHKNADKLQREAEDAEKRQQNLEDARKVKISEDPSLPVARKI 125
Query: 451 KICETTEHRGQRICIRGWVHRLR 519
+I E T +R R+ + GWVHRLR
Sbjct: 126 RIYEGTANRDSRVKVYGWVHRLR 148
>AY089487-1|AAL90225.1| 293|Drosophila melanogaster AT31162p
protein.
Length = 293
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 315 PNLLDFLQLRFCCYIIILSVIF*VYINCGKWL--FASMMHCFQYCLEWFLFRTITCV 151
P + + L FCC I++S+ VY+N +++ + SM+ Y LF TIT +
Sbjct: 194 PGSIFMIVLTFCCIAIVVSIYLIVYLNGNRYIMRYVSMVSLI-YVASLILF-TITVI 248
>AE014297-1179|AAF54542.1| 293|Drosophila melanogaster CG4073-PA
protein.
Length = 293
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 315 PNLLDFLQLRFCCYIIILSVIF*VYINCGKWL--FASMMHCFQYCLEWFLFRTITCV 151
P + + L FCC I++S+ VY+N +++ + SM+ Y LF TIT +
Sbjct: 194 PGSIFMIVLTFCCIAIVVSIYLIVYLNGNRYIMRYVSMVSLI-YVASLILF-TITVI 248
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +2
Query: 281 QNLN*RKSKRFGSARTIRRWTKLRQKRRIMKRDLKT*MKQRRFSCKRIQVYQRPLL*KYV 460
+ L +K + ++R KLRQK+ + + + +K+ R CKR QR +
Sbjct: 1005 EKLRQQKEQHRRQQNRVKRERKLRQKKEKQRLEYERFLKEYREDCKRQLRLQREHYLIKI 1064
Query: 461 KQL 469
KQL
Sbjct: 1065 KQL 1067
>BT025108-1|ABE73279.1| 338|Drosophila melanogaster IP10719p
protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 321 ADPNLLDFLQLRFCCYIIILSVIF 250
A PN++DF+Q R+C ++ SV F
Sbjct: 88 AAPNMMDFIQQRYCMVSLLDSVQF 111
>AE014296-2246|AAF49840.1| 338|Drosophila melanogaster CG11251-PA
protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 321 ADPNLLDFLQLRFCCYIIILSVIF 250
A PN++DF+Q R+C ++ SV F
Sbjct: 88 AAPNMMDFIQQRYCMVSLLDSVQF 111
>AY089248-1|AAL89986.1| 742|Drosophila melanogaster AT03371p
protein.
Length = 742
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 323 RTIRRWTKLRQKRRIMKRDLKT*MKQRRFSCKRI 424
R +R W+ LR+++++ +D+ K R F C RI
Sbjct: 177 RHLRLWSILREEKKLYVQDVLMASKTRVFYCARI 210
>AE014296-1169|AAF50630.1| 742|Drosophila melanogaster CG10064-PA
protein.
Length = 742
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 323 RTIRRWTKLRQKRRIMKRDLKT*MKQRRFSCKRI 424
R +R W+ LR+++++ +D+ K R F C RI
Sbjct: 177 RHLRLWSILREEKKLYVQDVLMASKTRVFYCARI 210
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,233,739
Number of Sequences: 53049
Number of extensions: 333775
Number of successful extensions: 981
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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