Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303F09f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q11XL6 Cluster: Probable membrane protein; n=2; Bactero...    33   3.0  
UniRef50_A6DB80 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_Q7RF31 Cluster: Putative uncharacterized protein PY0488...    33   4.0  
UniRef50_Q8EW65 Cluster: Putative uncharacterized protein MYPE33...    32   6.9  
UniRef50_UPI00006CDA21 Cluster: hypothetical protein TTHERM_0040...    32   9.2  

>UniRef50_Q11XL6 Cluster: Probable membrane protein; n=2;
           Bacteroidetes|Rep: Probable membrane protein - Cytophaga
           hutchinsonii (strain ATCC 33406 / NCIMB 9469)
          Length = 421

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 68  PILFVLTNAPNIQSGFTEHKPLSIQRIVFIYLLKKYIATLSGIPKLF 208
           P+L+VLT    I SG+   K L ++ ++F   +   I  L GIP+ F
Sbjct: 91  PVLYVLTIIALIISGYKGMKDLGLEAVIFSLSIGLLIRNLIGIPEWF 137


>UniRef50_A6DB80 Cluster: Putative uncharacterized protein; n=1;
           Caminibacter mediatlanticus TB-2|Rep: Putative
           uncharacterized protein - Caminibacter mediatlanticus
           TB-2
          Length = 757

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 20/53 (37%), Positives = 30/53 (56%)
 Frame = +1

Query: 142 KNCFYLFIKKIYCYSIRDSQTILGKRFVIQNNVDFKTLKILSQVFIPMKIKYL 300
           K   YL+ K    Y+++DS+    K F+ QN   ++ LKIL +  I  KI+YL
Sbjct: 622 KKIIYLY-KLAIKYNLKDSKYKFAK-FLYQNGKKYQALKILKKAKITPKIRYL 672


>UniRef50_Q7RF31 Cluster: Putative uncharacterized protein PY04880;
            n=11; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY04880 - Plasmodium yoelii yoelii
          Length = 2294

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 22/44 (50%), Positives = 28/44 (63%)
 Frame = +2

Query: 335  KFDIFYFLIKINQRKLHKIQYIQVNELQKYFLLK*C*FFIISWY 466
            K D+FYFLI IN+   +K +YIQ N L  +F+L    FFII  Y
Sbjct: 971  KNDLFYFLILINKIIKYKYKYIQ-NYL--HFILFNLSFFIIKLY 1011


>UniRef50_Q8EW65 Cluster: Putative uncharacterized protein MYPE3380;
           n=1; Mycoplasma penetrans|Rep: Putative uncharacterized
           protein MYPE3380 - Mycoplasma penetrans
          Length = 234

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
 Frame = +1

Query: 136 NTKNCFYLFIKKIYCYSIRDSQTILGKR---FVIQNNVDFKT---LKILSQVFIPMKIKY 297
           N +N FY  + +   ++ RD +  LGK     +++NN+D  T   L +L+ +    KIK 
Sbjct: 47  NARNLFYGCLSEFMFFASRDIENKLGKLKKVVLLENNIDISTRTPLLLLNAIIYKNKIKG 106

Query: 298 LSI 306
           +S+
Sbjct: 107 ISV 109


>UniRef50_UPI00006CDA21 Cluster: hypothetical protein TTHERM_00400790;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00400790 - Tetrahymena thermophila SB210
          Length = 2343

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 34/125 (27%), Positives = 57/125 (45%)
 Frame = +3

Query: 15   GKLIDKMENLNIAAHIKTPFYLY*LMLLIFKVDLLNTNHFQYKELFLFIY*KNILLLYQG 194
            G+LI K++       +++   LY  + + F V ++ + + +  +  L    + IL++   
Sbjct: 948  GQLIQKIQKCFQNNQLES--ILYQPLSIHFLVKIIYSKNIEDIDTLLSDLNEQILIVDFF 1005

Query: 195  FPNYFGKEIRNSEQCRL*DFKNPISSFYSYENKILINLETFQ*VN*VNLTYFIFSSKSTK 374
            F  YF KE  N     + D KNP+ S YS  N+     E FQ     N+   +F SK   
Sbjct: 1006 FKEYFQKEAENFMSQNILDVKNPMLS-YSITNQF---FEFFQ-----NIAMQMFISKEKY 1056

Query: 375  ENCIK 389
             N +K
Sbjct: 1057 NNYLK 1061


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,485,449
Number of Sequences: 1657284
Number of extensions: 9132610
Number of successful extensions: 17079
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17076
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)