Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303F09f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0503 - 18170645-18170858,18171029-18171222,18171419-181716...    29   1.7  
04_04_0207 + 23602065-23604315,23604611-23605116                       28   4.0  

>09_04_0503 -
           18170645-18170858,18171029-18171222,18171419-18171629,
           18172162-18172553,18172926-18173054,18173353-18173487,
           18173885-18174088,18174716-18174771,18174793-18174950,
           18175864-18176231
          Length = 686

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 14  WKIN*QNGKFEYCCPHQNPILFVLTNAP 97
           W +  ++ K +Y   H N   ++LTNAP
Sbjct: 208 WPVQKRSDKVQYFLEHHNGFFYILTNAP 235


>04_04_0207 + 23602065-23604315,23604611-23605116
          Length = 918

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +1

Query: 169 KIYCYSIRDSQTILGKRFVIQNNVDFKTLKILSQVFIPMKIKYLS 303
           K+Y   ++D Q I  K+F+  +N  F  +K   + F  ++ K ++
Sbjct: 590 KVYLIELQDGQNIAVKKFICSSNQTFGAVKNHMKTFAKIRHKNIA 634


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,488,464
Number of Sequences: 37544
Number of extensions: 201187
Number of successful extensions: 275
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)