Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303F09f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY129432-1|AAM76174.1|  744|Drosophila melanogaster GM04379p pro...    29   3.8  
AY089639-1|AAL90377.1|  595|Drosophila melanogaster RE56519p pro...    29   3.8  
AE014297-2081|AAN13676.1|  744|Drosophila melanogaster CG17604-P...    29   3.8  
AE014297-2080|AAN13675.1|  744|Drosophila melanogaster CG17604-P...    29   3.8  
AE014297-2079|AAF55223.1|  744|Drosophila melanogaster CG17604-P...    29   3.8  

>AY129432-1|AAM76174.1|  744|Drosophila melanogaster GM04379p
           protein.
          Length = 744

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 329 LSKFDIFYFLIKINQRKLHKIQYIQVNELQK 421
           L+K  + +  +K N  KLHK   +QV+ELQ+
Sbjct: 446 LNKASVDFTQLKSNSEKLHKETLLQVSELQE 476


>AY089639-1|AAL90377.1|  595|Drosophila melanogaster RE56519p
           protein.
          Length = 595

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 329 LSKFDIFYFLIKINQRKLHKIQYIQVNELQK 421
           L+K  + +  +K N  KLHK   +QV+ELQ+
Sbjct: 297 LNKASVDFTQLKSNSEKLHKETLLQVSELQE 327


>AE014297-2081|AAN13676.1|  744|Drosophila melanogaster CG17604-PC,
           isoform C protein.
          Length = 744

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 329 LSKFDIFYFLIKINQRKLHKIQYIQVNELQK 421
           L+K  + +  +K N  KLHK   +QV+ELQ+
Sbjct: 446 LNKASVDFTQLKSNSEKLHKETLLQVSELQE 476


>AE014297-2080|AAN13675.1|  744|Drosophila melanogaster CG17604-PB,
           isoform B protein.
          Length = 744

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 329 LSKFDIFYFLIKINQRKLHKIQYIQVNELQK 421
           L+K  + +  +K N  KLHK   +QV+ELQ+
Sbjct: 446 LNKASVDFTQLKSNSEKLHKETLLQVSELQE 476


>AE014297-2079|AAF55223.1|  744|Drosophila melanogaster CG17604-PA,
           isoform A protein.
          Length = 744

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 329 LSKFDIFYFLIKINQRKLHKIQYIQVNELQK 421
           L+K  + +  +K N  KLHK   +QV+ELQ+
Sbjct: 446 LNKASVDFTQLKSNSEKLHKETLLQVSELQE 476


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,447,137
Number of Sequences: 53049
Number of extensions: 383358
Number of successful extensions: 437
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)