Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303F09f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83218-2|CAB05687.1|  705|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AF067942-4|AAG45573.2|  324|Caenorhabditis elegans Hypothetical ...    29   1.5  
Z92782-11|CAE17813.1|  382|Caenorhabditis elegans Hypothetical p...    28   3.5  
Z93381-6|CAB07609.1|  724|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z83218-8|CAB05693.1|  724|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z83218-2|CAB05687.1|  705|Caenorhabditis elegans Hypothetical
           protein C31A11.5 protein.
          Length = 705

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -2

Query: 379 FSLVDFDEKIKYVKFTQLTYWKVSKL 302
           FS  D+D K+K+  F++ TY+  S+L
Sbjct: 535 FSTYDYDNKVKWSIFSRATYYNFSRL 560


>AF067942-4|AAG45573.2|  324|Caenorhabditis elegans Hypothetical
           protein ZK6.6 protein.
          Length = 324

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +1

Query: 67  PHFICTN*CS*YSKWIY*TQTTFNTKNCFYLFIKKIYCYSIRDSQTILG 213
           P F+ T   + +   IY T  TFN  N   +++  IY + +   +TI+G
Sbjct: 104 PTFLLTGMYTAFWVSIYPTSLTFNMHNSKMIYLPAIYGFGVGVGETIMG 152


>Z92782-11|CAE17813.1|  382|Caenorhabditis elegans Hypothetical
           protein F14F8.11 protein.
          Length = 382

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -3

Query: 174 YFFNK*IKTILCIESGLCSVNPL*IL 97
           Y FNK I +++  +SGLC+V PL I+
Sbjct: 151 YPFNKRISSLVTSKSGLCTVIPLSII 176


>Z93381-6|CAB07609.1|  724|Caenorhabditis elegans Hypothetical
           protein C31A11.1 protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 379 FSLVDFDEKIKYVKFTQLTYWKVSKL 302
           FS  D+D K+ +  F++ TY+  S+L
Sbjct: 535 FSTYDYDNKVNWSIFSRATYFNFSRL 560


>Z83218-8|CAB05693.1|  724|Caenorhabditis elegans Hypothetical
           protein C31A11.1 protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 379 FSLVDFDEKIKYVKFTQLTYWKVSKL 302
           FS  D+D K+ +  F++ TY+  S+L
Sbjct: 535 FSTYDYDNKVNWSIFSRATYFNFSRL 560


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,528,499
Number of Sequences: 27780
Number of extensions: 235687
Number of successful extensions: 426
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)