Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303F07f
         (513 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.69 
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   1.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   2.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   2.8  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.69
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 143 SRNFYSIWFQQIT*KADYFC 84
           S +F +IW+  +  KAD FC
Sbjct: 298 SEDFKAIWYSILIKKADSFC 317


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 234 IDQEKLKKLSVIDDSDELFENGH 302
           + Q++LKK   +D+ D  +ENGH
Sbjct: 56  LQQQQLKKQR-LDNGDYPYENGH 77


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 222 SKEPIDQEKLKKLSVIDDSDELFENGHY 305
           +K+P+  + LK L ++ + + + E  HY
Sbjct: 88  TKKPLWFKLLKNLKMVQNHNNIREKSHY 115


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +3

Query: 222 SKEPIDQEKLKKLSVIDDSDELFENGHY 305
           +K+P+  + LK L ++ + + + E  HY
Sbjct: 88  TKKPLWFKLLKNLKMVQNHNNIREKSHY 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,404
Number of Sequences: 336
Number of extensions: 2546
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)