Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303F07f
(513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009671-1|AAH09671.1| 314|Homo sapiens family with sequence si... 77 3e-14
AF151848-1|AAD34085.1| 314|Homo sapiens CGI-90 protein protein. 77 3e-14
BC030606-1|AAH30606.2| 514|Homo sapiens coiled-coil domain cont... 32 1.4
AK057305-1|BAB71418.1| 399|Homo sapiens protein ( Homo sapiens ... 32 1.4
BC096826-1|AAH96826.1| 804|Homo sapiens DDX24 protein protein. 30 4.1
BC009406-1|AAH09406.1| 859|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 4.1
BC008847-1|AAH08847.1| 859|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 4.1
AK025162-1|BAB15079.1| 859|Homo sapiens protein ( Homo sapiens ... 30 4.1
AF214731-1|AAG02169.1| 859|Homo sapiens ATP-dependent RNA helic... 30 4.1
AF145022-1|AAP97274.1| 454|Homo sapiens ATP-dependent RNA helic... 30 4.1
AF134475-1|AAP97252.1| 486|Homo sapiens ATP-dependent RNA helic... 30 4.1
AB209382-1|BAD92619.1| 676|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 4.1
AK093661-1|BAC04214.1| 360|Homo sapiens protein ( Homo sapiens ... 29 9.5
>BC009671-1|AAH09671.1| 314|Homo sapiens family with sequence
similarity 82, member B protein.
Length = 314
Score = 77.4 bits (182), Expect = 3e-14
Identities = 32/83 (38%), Positives = 55/83 (66%)
Frame = +3
Query: 264 VIDDSDELFENGHYEECYNLLKNYEENQDIEIQWRICRALYNMAKESKYNNAQKKDFIFE 443
+++ +D L+E+G E+ Y LL Y+E++D E+ WR+ RA ++A+ S+ + +KK ++E
Sbjct: 86 ILEQADYLYESGETEKLYQLLTQYKESEDAELLWRLARASRDVAQLSRTSEEEKKLLVYE 145
Query: 444 AYEIISKHLNNNENNFAVHKWXA 512
A E + L NE++FA HKW A
Sbjct: 146 ALEYAKRALEKNESSFASHKWYA 168
>AF151848-1|AAD34085.1| 314|Homo sapiens CGI-90 protein protein.
Length = 314
Score = 77.4 bits (182), Expect = 3e-14
Identities = 32/83 (38%), Positives = 55/83 (66%)
Frame = +3
Query: 264 VIDDSDELFENGHYEECYNLLKNYEENQDIEIQWRICRALYNMAKESKYNNAQKKDFIFE 443
+++ +D L+E+G E+ Y LL Y+E++D E+ WR+ RA ++A+ S+ + +KK ++E
Sbjct: 86 ILEQADYLYESGETEKLYQLLTQYKESEDAELLWRLARASRDVAQLSRTSEEEKKLLVYE 145
Query: 444 AYEIISKHLNNNENNFAVHKWXA 512
A E + L NE++FA HKW A
Sbjct: 146 ALEYAKRALEKNESSFASHKWYA 168
>BC030606-1|AAH30606.2| 514|Homo sapiens coiled-coil domain
containing 11 protein.
Length = 514
Score = 31.9 bits (69), Expect = 1.4
Identities = 28/114 (24%), Positives = 53/114 (46%)
Frame = +3
Query: 129 IKVAREITQIQFPRNLIFVSTGLAFLWPIKKSKEPIDQEKLKKLSVIDDSDELFENGHYE 308
IK R+ TQ+ V + A IK E Q+ LKK ++ + + E
Sbjct: 241 IKAQRQATQLLKEEEARLVESNNA---QIKHENE---QDMLKKQKAKQETRTILQKALQE 294
Query: 309 ECYNLLKNYEENQDIEIQWRICRALYNMAKESKYNNAQKKDFIFEAYEIISKHL 470
++ + Y + QD+ ++ + RAL ++ +E+ +++D I E +I K+L
Sbjct: 295 RIEHIQQEYRDEQDLNMK-LVQRALQDLQEEADKKKQKREDMIRE-QKIYHKYL 346
>AK057305-1|BAB71418.1| 399|Homo sapiens protein ( Homo sapiens
cDNA FLJ32743 fis, clone TESTI2001412, weakly similar to
TRICHOHYALIN. ).
Length = 399
Score = 31.9 bits (69), Expect = 1.4
Identities = 28/114 (24%), Positives = 53/114 (46%)
Frame = +3
Query: 129 IKVAREITQIQFPRNLIFVSTGLAFLWPIKKSKEPIDQEKLKKLSVIDDSDELFENGHYE 308
IK R+ TQ+ V + A IK E Q+ LKK ++ + + E
Sbjct: 126 IKAQRQATQLLKEEEARLVESNNA---QIKHENE---QDMLKKQKAKQETRTILQKALQE 179
Query: 309 ECYNLLKNYEENQDIEIQWRICRALYNMAKESKYNNAQKKDFIFEAYEIISKHL 470
++ + Y + QD+ ++ + RAL ++ +E+ +++D I E +I K+L
Sbjct: 180 RIEHIQQEYRDEQDLNMK-LVQRALQDLQEEADKKKQKREDMIRE-QKIYHKYL 231
>BC096826-1|AAH96826.1| 804|Homo sapiens DDX24 protein protein.
Length = 804
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 204 LWPIKKSKEPIDQEKLKKLS--VIDDSDELFENGHYEECYNLLKNYEENQ 347
LW + K K L++L V+D++D + E GH+ E LL+ ++Q
Sbjct: 393 LWELIKEKH-YHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEMLNDSQ 441
>BC009406-1|AAH09406.1| 859|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 24 protein.
Length = 859
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 204 LWPIKKSKEPIDQEKLKKLS--VIDDSDELFENGHYEECYNLLKNYEENQ 347
LW + K K L++L V+D++D + E GH+ E LL+ ++Q
Sbjct: 448 LWELIKEKH-YHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEMLNDSQ 496
>BC008847-1|AAH08847.1| 859|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 24 protein.
Length = 859
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 204 LWPIKKSKEPIDQEKLKKLS--VIDDSDELFENGHYEECYNLLKNYEENQ 347
LW + K K L++L V+D++D + E GH+ E LL+ ++Q
Sbjct: 448 LWELIKEKH-YHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEMLNDSQ 496
>AK025162-1|BAB15079.1| 859|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21509 fis, clone COL05745. ).
Length = 859
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 204 LWPIKKSKEPIDQEKLKKLS--VIDDSDELFENGHYEECYNLLKNYEENQ 347
LW + K K L++L V+D++D + E GH+ E LL+ ++Q
Sbjct: 448 LWELIKEKH-YHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEMLNDSQ 496
>AF214731-1|AAG02169.1| 859|Homo sapiens ATP-dependent RNA helicase
protein.
Length = 859
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 204 LWPIKKSKEPIDQEKLKKLS--VIDDSDELFENGHYEECYNLLKNYEENQ 347
LW + K K L++L V+D++D + E GH+ E LL+ ++Q
Sbjct: 448 LWELIKEKH-YHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEMLNDSQ 496
>AF145022-1|AAP97274.1| 454|Homo sapiens ATP-dependent RNA helicase
protein.
Length = 454
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 204 LWPIKKSKEPIDQEKLKKLS--VIDDSDELFENGHYEECYNLLKNYEENQ 347
LW + K K L++L V+D++D + E GH+ E LL+ ++Q
Sbjct: 75 LWELIKEKH-YHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEMLNDSQ 123
>AF134475-1|AAP97252.1| 486|Homo sapiens ATP-dependent RNA helicase
protein.
Length = 486
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 204 LWPIKKSKEPIDQEKLKKLS--VIDDSDELFENGHYEECYNLLKNYEENQ 347
LW + K K L++L V+D++D + E GH+ E LL+ ++Q
Sbjct: 75 LWELIKEKH-YHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEMLNDSQ 123
>AB209382-1|BAD92619.1| 676|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 24 variant protein.
Length = 676
Score = 30.3 bits (65), Expect = 4.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 204 LWPIKKSKEPIDQEKLKKLS--VIDDSDELFENGHYEECYNLLKNYEENQ 347
LW + K K L++L V+D++D + E GH+ E LL+ ++Q
Sbjct: 454 LWELIKEKH-YHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEMLNDSQ 502
>AK093661-1|BAC04214.1| 360|Homo sapiens protein ( Homo sapiens
cDNA FLJ36342 fis, clone THYMU2006666, highly similar to
Homo sapiens putative ATP-dependent RNA helicase ROK1
mRNA. ).
Length = 360
Score = 29.1 bits (62), Expect = 9.5
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +3
Query: 177 IFVSTGLAFLWPIKKSKEPIDQEKLKKLSVIDDSDELFENG 299
I V+T ++ +K+ ID ++ L V+D+SD+LFE+G
Sbjct: 180 ILVTTPNRLIYSLKQDPPGIDLASVEWL-VVDESDKLFEDG 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,415,736
Number of Sequences: 237096
Number of extensions: 1224361
Number of successful extensions: 2840
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2837
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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