Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303F07f
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81526-3|CAB04261.2| 301|Caenorhabditis elegans Hypothetical pr... 74 5e-14
Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z49907-3|CAA90085.1| 225|Caenorhabditis elegans Hypothetical pr... 38 0.003
AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical ... 38 0.003
AC006681-5|AAK85491.1| 225|Caenorhabditis elegans Hypothetical ... 38 0.003
Z81123-1|CAB03364.2| 405|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z71262-10|CAA95816.4| 436|Caenorhabditis elegans Hypothetical p... 32 0.28
AY037801-1|AAK94766.1| 436|Caenorhabditis elegans GLY-19 protein. 32 0.28
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z50739-1|CAA90604.1| 400|Caenorhabditis elegans Hypothetical pr... 28 3.4
U50309-2|AAG24136.2| 334|Caenorhabditis elegans Seven tm recept... 28 3.4
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 3.4
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 28 4.5
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 28 4.5
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 28 4.5
AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical ... 28 4.5
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 27 6.0
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68337-2|CAA92746.2| 516|Caenorhabditis elegans Hypothetical pr... 27 7.9
U41546-4|AAC48218.1| 150|Caenorhabditis elegans Hypothetical pr... 27 7.9
>Z81526-3|CAB04261.2| 301|Caenorhabditis elegans Hypothetical
protein F33H2.6 protein.
Length = 301
Score = 74.1 bits (174), Expect = 5e-14
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +3
Query: 264 VIDDSDELFENGHYEECYNLLKNYEENQDIEIQWRICRALYNMAKESKYNNAQKKDFIFE 443
++ +SDEL++N + CYN+LK +E + E+ WR+ R + K SK N Q+K+ I E
Sbjct: 68 IVRNSDELYDNYLIDNCYNILKKFENSNCSELLWRLARVVCEKGKLSKDQN-QRKELILE 126
Query: 444 AYEIISKHLNNNENN--FAVHKWXA 512
AY I+ K L+N N F HKW A
Sbjct: 127 AYGIVKKALDNEPKNGCFGAHKWYA 151
>Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical
protein C27H6.4b protein.
Length = 331
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 KLSVIDDSDELFENGHYEECYNLLKN-YEENQ-DIEIQWRICRALYNMAKESKYNNAQKK 428
K +D D LF +E Y+ LK Y+ + I++ WR+ + + ++ ++K
Sbjct: 105 KTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWRLAKFCNEIG--NRVEKDKRK 162
Query: 429 DFIFEAYEIISKHLNNNENNFAVHKWXA 512
D I E + ++ N + NNF +W A
Sbjct: 163 DIIVEGKKYATEAWNTDSNNFLAARWAA 190
>Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical
protein C27H6.4a protein.
Length = 272
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +3
Query: 255 KLSVIDDSDELFENGHYEECYNLLKN-YEENQ-DIEIQWRICRALYNMAKESKYNNAQKK 428
K +D D LF +E Y+ LK Y+ + I++ WR+ + + ++ ++K
Sbjct: 46 KTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWRLAKFCNEIG--NRVEKDKRK 103
Query: 429 DFIFEAYEIISKHLNNNENNFAVHKWXA 512
D I E + ++ N + NNF +W A
Sbjct: 104 DIIVEGKKYATEAWNTDSNNFLAARWAA 131
>Z49907-3|CAA90085.1| 225|Caenorhabditis elegans Hypothetical
protein B0491.3 protein.
Length = 225
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 270 DDSDELFENGHYEECYNLLKNYEENQD--IEIQWRICRALYNMAKESKYNNAQKKDFIFE 443
D+ D+ F + ++ Y+LLK + D +E+ WR+ + ++ K + AQ+K + E
Sbjct: 4 DEIDKTFGTKNRDQGYDLLKARLDKGDRSVEVLWRLAQVIHE--KSACVPKAQRKASVTE 61
Query: 444 AYEIISKHLNNNENNFAVHKWXA 512
+ + + + N+F KW A
Sbjct: 62 GLKFAEEAVQKDPNHFKALKWNA 84
>AF078790-2|AAC26940.1| 215|Caenorhabditis elegans Hypothetical
protein F36H12.11 protein.
Length = 215
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 270 DDSDELFENGHYEECYNLLKNYEENQD--IEIQWRICRALYNMAKESKYNNAQKKDFIFE 443
D+ D+ F + ++ Y+LLK + D +E+ WR+ + ++ K + AQ+K + E
Sbjct: 4 DEIDKTFGTKNRDQGYDLLKARLDKGDRSVEVLWRLAQVIHE--KSACVPKAQRKASVTE 61
Query: 444 AYEIISKHLNNNENNFAVHKWXA 512
+ + + + N+F KW A
Sbjct: 62 GLKFAEEAVQKDPNHFKALKWNA 84
>AC006681-5|AAK85491.1| 225|Caenorhabditis elegans Hypothetical
protein R13H9.1 protein.
Length = 225
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 270 DDSDELFENGHYEECYNLLKNYEENQD--IEIQWRICRALYNMAKESKYNNAQKKDFIFE 443
D+ D+ F + ++ Y+LLK + D +E+ WR+ + ++ K + AQ+K + E
Sbjct: 4 DEIDKTFGTKNRDQGYDLLKARLDKGDRSVEVLWRLAQVIHE--KSACVPKAQRKASVTE 61
Query: 444 AYEIISKHLNNNENNFAVHKWXA 512
+ + + + N+F KW A
Sbjct: 62 GLKFAEEAVQKDPNHFKALKWNA 84
>Z81123-1|CAB03364.2| 405|Caenorhabditis elegans Hypothetical
protein T14D7.1 protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.28
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +3
Query: 204 LWPIKKSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLKNYEENQDIEIQWRICRAL 383
L PI S +++ + +K V + E G+Y C LK Y I + + AL
Sbjct: 234 LAPISFSDRAMEKIRNRKQRVASFYFDAIELGNYWGCDGELKRYHHTAPISTVYALRAAL 293
Query: 384 YNMAKESKYNNAQK-KDFIFEAYEIISKH 467
+AKE + Q+ KD Y + KH
Sbjct: 294 SAIAKEGIDESIQRHKDNAQVLYATLKKH 322
>Z71262-10|CAA95816.4| 436|Caenorhabditis elegans Hypothetical
protein F22D6.12 protein.
Length = 436
Score = 31.9 bits (69), Expect = 0.28
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +3
Query: 177 IFVSTGLAFLWPIKKSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLKNYEENQDIE 356
+F+ + L+P K+ + + ++ LK + L +N C N+LK Y+ N+ ++
Sbjct: 17 LFIYFSVESLFPRKQEDKNVSKQFLKSICTTASDSYLLDNMEIN-CSNILKGYKTNEKLD 75
Query: 357 I 359
I
Sbjct: 76 I 76
>AY037801-1|AAK94766.1| 436|Caenorhabditis elegans GLY-19 protein.
Length = 436
Score = 31.9 bits (69), Expect = 0.28
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +3
Query: 177 IFVSTGLAFLWPIKKSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLKNYEENQDIE 356
+F+ + L+P K+ + + ++ LK + L +N C N+LK Y+ N+ ++
Sbjct: 17 LFIYFSVESLFPRKQEDKNVSKQFLKSICTTASDSYLLDNMEIN-CSNILKGYKTNEKLD 75
Query: 357 I 359
I
Sbjct: 76 I 76
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +3
Query: 213 IKKSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLK 329
++K + + EKL + + ++ + +L NG YEEC +L+K
Sbjct: 643 LEKLRNMSETEKLMRFNKLETAADLL-NGKYEECSDLIK 680
>Z50739-1|CAA90604.1| 400|Caenorhabditis elegans Hypothetical
protein F13D2.2 protein.
Length = 400
Score = 28.3 bits (60), Expect = 3.4
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 286 CLKTDIMRNAIIYSKIMRKTRTLKFNGVSVVHYTTW 393
C+ D +RN I ++I T+T K + VS++ Y++W
Sbjct: 123 CIALDRLRNVIYANQI--HTKTDKISTVSILAYSSW 156
>U50309-2|AAG24136.2| 334|Caenorhabditis elegans Seven tm receptor
protein 146 protein.
Length = 334
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 172 FLGNCICVISLATFIRFGFNKSLEKQITFVKIGYKFLY 59
F+ IC I+ F+ FG + S+EKQ+ ++K K +Y
Sbjct: 131 FVPCLICFIAWYAFVYFGMHNSIEKQL-YLKDELKTVY 167
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 336 EENQDIEIQWRICRALYNMAKESKYNNAQKKDFIFEAYEIISKHLNNNENNFAVHK 503
E++ IEIQW RA + E A++KDF++ K + E FA H+
Sbjct: 2669 EKSSIIEIQWT--RAQWKKWYEKNIAKAEQKDFVYRTKTEEEKDEMDLEEFFANHE 2722
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 231 PIDQEKLKKLSVIDDSDELFENGHYEECYNLLK-NYEENQDIEIQW 365
PID+E +K+ ID+ +E E+ EE ++ K + +E+++ EI+W
Sbjct: 119 PIDEEDNEKIFPIDEEEE--EDLKIEEKKSVRKLSSDEDEEEEIEW 162
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +3
Query: 84 TKVICFSSDLLKPNRIKVAREITQIQFPRNLIFVSTGLAFLWPIKKSKEPIDQEKLKKLS 263
T ++ D PN I++A + ++ + AF PIK++K + Q ++ LS
Sbjct: 1653 TAIVQCLIDKRSPNPIELAAMKMNRRMKSEMLKIVKNAAFPRPIKETKLTLQQVHIEPLS 1712
Query: 264 VIDDSDELF 290
+D+ F
Sbjct: 1713 DVDEDAAKF 1721
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +3
Query: 84 TKVICFSSDLLKPNRIKVAREITQIQFPRNLIFVSTGLAFLWPIKKSKEPIDQEKLKKLS 263
T ++ D PN I++A + ++ + AF PIK++K + Q ++ LS
Sbjct: 1691 TAIVQCLIDKRSPNPIELAAMKMNRRMKSEMLKIVKNAAFPRPIKETKLTLQQVHIEPLS 1750
Query: 264 VIDDSDELF 290
+D+ F
Sbjct: 1751 DVDEDAAKF 1759
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +3
Query: 84 TKVICFSSDLLKPNRIKVAREITQIQFPRNLIFVSTGLAFLWPIKKSKEPIDQEKLKKLS 263
T ++ D PN I++A + ++ + AF PIK++K + Q ++ LS
Sbjct: 1653 TAIVQCLIDKRSPNPIELAAMKMNRRMKSEMLKIVKNAAFPRPIKETKLTLQQVHIEPLS 1712
Query: 264 VIDDSDELF 290
+D+ F
Sbjct: 1713 DVDEDAAKF 1721
>AF000266-4|ABB51177.1| 403|Caenorhabditis elegans Hypothetical
protein W08F4.8b protein.
Length = 403
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 216 KKSKEPIDQEKLKKLSVIDDSDELFEN 296
K SK PID K K + V DD D+ N
Sbjct: 30 KFSKMPIDYSKWKDIEVSDDEDDTHPN 56
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
assigned gene nameprotein 213 protein.
Length = 1437
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 285 LFENGHYEECYNLLKNYEENQDIEIQWRICRALYNMAKESKYNNAQKKD 431
L E+G++++ L+ E ++ R+CRAL + ++S N+ KK+
Sbjct: 335 LLESGNWKQAQMLIDRLPEYYAVQASPRLCRALCKIIEKS-INDFYKKN 382
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +3
Query: 222 SKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLLKNYEENQDIEI 359
S P D ++K + V+D++DE+ G ++ Y + ++ QD+++
Sbjct: 122 SNIPSDTSRIK-MFVLDEADEMLSKGFKDQIYEVFRSMP--QDVQV 164
>Z68337-2|CAA92746.2| 516|Caenorhabditis elegans Hypothetical
protein M7.2 protein.
Length = 516
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 45 GTMSRYKNLYPILTKVICFSSDLLKPNRIKVAREITQI 158
G +YK P+ + + +LL PN VA+++T +
Sbjct: 296 GKRGKYKESEPLCKRALEIRKNLLGPNHPDVAKQLTNL 333
>U41546-4|AAC48218.1| 150|Caenorhabditis elegans Hypothetical
protein T25B6.3 protein.
Length = 150
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 174 LIFVSTGLAFLWPIKKSKEPIDQEKLKKLSVIDDSDELFENGHYEECYNLL--KNYEEN 344
LI + A + +K++++ ++ L K+ + S ELF+ C+N L KN+ EN
Sbjct: 11 LICIVIATAKIEELKETEQILELNNLAKVDMSSASKELFQEFMSTLCWNNLTPKNFLEN 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,222,673
Number of Sequences: 27780
Number of extensions: 229363
Number of successful extensions: 809
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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