Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303F06f
(512 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical pr... 219 7e-58
U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical pr... 37 0.010
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 0.85
AY724774-1|AAU21474.1| 750|Caenorhabditis elegans UNC-89-B prot... 30 0.85
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 30 0.85
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 0.85
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 0.85
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 30 0.85
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 0.85
Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 29 1.5
AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical ... 29 2.0
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 29 2.6
U55856-3|AAA98022.2| 472|Caenorhabditis elegans Hypothetical pr... 28 3.4
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 28 3.4
U39652-5|AAV28338.1| 986|Caenorhabditis elegans Hypothetical pr... 27 6.0
U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical pr... 27 6.0
AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid deplet... 27 6.0
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 27 7.9
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 27 7.9
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 27 7.9
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 27 7.9
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 27 7.9
AF036706-17|AAK39277.2| 582|Caenorhabditis elegans Enhanced rna... 27 7.9
>Z69302-5|CAA93262.1| 189|Caenorhabditis elegans Hypothetical
protein F40F8.10 protein.
Length = 189
Score = 219 bits (536), Expect = 7e-58
Identities = 103/119 (86%), Positives = 114/119 (95%)
Frame = -3
Query: 420 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 241
LE+KDPKRLFEGNALLRRLV+IGVLDE +MKLDYVLGLK+EDFLERRLQTQVFK GLAKS
Sbjct: 62 LEDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKS 121
Query: 240 IHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKG 64
IHHARILI+Q HIRVR+QVV++PSFIVRLDS KHIDFSL+SP+GGGRPGRVKR+ LRKG
Sbjct: 122 IHHARILIKQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRRTLRKG 180
>U97189-6|AAC48162.1| 183|Caenorhabditis elegans Hypothetical
protein C48B6.2 protein.
Length = 183
Score = 36.7 bits (81), Expect = 0.010
Identities = 26/101 (25%), Positives = 46/101 (45%)
Frame = -3
Query: 420 LEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKS 241
L E DP R +L + G++ L+ + + F RRL + G+ +S
Sbjct: 64 LSESDPFRSKCTEDMLTKFYAAGLVPTSDT-LERIGKVTGASFARRRLPVVMRNIGMCES 122
Query: 240 IHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 118
+ A L+ Q H+R+ ++V P+F+V S I ++ S
Sbjct: 123 VKTASDLVEQGHVRIGTKLVTDPAFMVTRSSEDMITWTKAS 163
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 369 DVEGHYLRTISWGPSPRGGARYP 437
+V GHYL T+SW P+ R RYP
Sbjct: 6286 EVTGHYL-TLSWIPTKRAPPRYP 6307
>AY724774-1|AAU21474.1| 750|Caenorhabditis elegans UNC-89-B
protein.
Length = 750
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 369 DVEGHYLRTISWGPSPRGGARYP 437
+V GHYL T+SW P+ R RYP
Sbjct: 365 EVTGHYL-TLSWIPTKRAPPRYP 386
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 369 DVEGHYLRTISWGPSPRGGARYP 437
+V GHYL T+SW P+ R RYP
Sbjct: 5646 EVTGHYL-TLSWIPTKRAPPRYP 5667
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 369 DVEGHYLRTISWGPSPRGGARYP 437
+V GHYL T+SW P+ R RYP
Sbjct: 6286 EVTGHYL-TLSWIPTKRAPPRYP 6307
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 369 DVEGHYLRTISWGPSPRGGARYP 437
+V GHYL T+SW P+ R RYP
Sbjct: 6286 EVTGHYL-TLSWIPTKRAPPRYP 6307
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 369 DVEGHYLRTISWGPSPRGGARYP 437
+V GHYL T+SW P+ R RYP
Sbjct: 5646 EVTGHYL-TLSWIPTKRAPPRYP 5667
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 369 DVEGHYLRTISWGPSPRGGARYP 437
+V GHYL T+SW P+ R RYP
Sbjct: 6286 EVTGHYL-TLSWIPTKRAPPRYP 6307
>Z78063-3|CAB01502.1| 236|Caenorhabditis elegans Hypothetical
protein F45D3.3 protein.
Length = 236
Score = 29.5 bits (63), Expect = 1.5
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = -2
Query: 340 KTDETRLCAWSE---D*GLLGASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPI 170
KTDE A S+ D G +SA A V + P + S NFD K SC C PI
Sbjct: 107 KTDEIVESAESDSSSDTDYFGEASASAPVSN-PALTYLSGANFDNVKQPSCQMLGCTGPI 165
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 375 EGHYLRTISWGPSPRGGARYPIRPIVSRITIHWPSFYNVVT 497
E H W P G RY + P +I +H PS +NV++
Sbjct: 932 EDHDFCRFLWQPWNPGTQRYQLTPQSPKIILHEPSTWNVLS 972
>AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical
protein Y49F6B.9 protein.
Length = 382
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 177 CSQLACGHEYAFAGSKFWHDG 239
C + CG E+ F K WH+G
Sbjct: 152 CQRPGCGREFCFKCRKVWHEG 172
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 174 GCSQLACGHEYAFAGSKFWH 233
GC +L +EY FA K WH
Sbjct: 339 GCDELIFANEYTFAEEKSWH 358
>U55856-3|AAA98022.2| 472|Caenorhabditis elegans Hypothetical
protein F31E8.5 protein.
Length = 472
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 426 PPLEEKDPKRLFEGNALLRRL-VRIGVLDEKQMKLDYVLGLK 304
PP++EKD K+ + A L+ L ++ GVL ++ + V GLK
Sbjct: 241 PPVKEKDAKKSIDLLAYLKTLDMKNGVLANREKTCESVGGLK 282
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 279 DDAPRSPQSSDQAHNRVSSVFHPVLQYEPDDVEGHY--LRTISWGPS 413
+DA + Q+S A + + ++H V + E +GH+ + T++W PS
Sbjct: 252 EDAMQVTQTSVSAGHFEAKIYHMVFEEEFARFKGHFGPINTMAWHPS 298
>U39652-5|AAV28338.1| 986|Caenorhabditis elegans Hypothetical
protein R07E4.1b protein.
Length = 986
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/42 (23%), Positives = 28/42 (66%)
Frame = -3
Query: 306 KIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 181
++EDFLE+ ++ ++ ++ ++I H+R LI+ + ++ ++
Sbjct: 164 QMEDFLEKTVRPRMLQSVSVEAISHSRALIQFNYKEPQQSII 205
>U39652-4|AAV28337.1| 1122|Caenorhabditis elegans Hypothetical
protein R07E4.1a protein.
Length = 1122
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/42 (23%), Positives = 28/42 (66%)
Frame = -3
Query: 306 KIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVV 181
++EDFLE+ ++ ++ ++ ++I H+R LI+ + ++ ++
Sbjct: 300 QMEDFLEKTVRPRMLQSVSVEAISHSRALIQFNYKEPQQSII 341
>AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid depleted
protein 3 protein.
Length = 1599
Score = 27.5 bits (58), Expect = 6.0
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -3
Query: 477 TASEL*YDSL*GELGTGPPLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIE 298
TA L DSL GEL ++E+ K GNA++ ++G L + D V +
Sbjct: 93 TAVRLTVDSLEGELTNKWVVKEEGSKERIYGNAVIHFNAKLGQLIKPVPTGDSVAATDVT 152
Query: 297 DFLE-RRLQTQV 265
D E TQV
Sbjct: 153 DLQEFATFMTQV 164
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
Frame = -2
Query: 247 EVHPSCQNFDP------AKAYSCPQASCEHPII 167
+VH QNFD AKA S PQ + EHP I
Sbjct: 778 DVHDELQNFDQHIKVLHAKAESLPQEAREHPDI 810
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
Frame = -2
Query: 247 EVHPSCQNFDP------AKAYSCPQASCEHPII 167
+VH QNFD AKA S PQ + EHP I
Sbjct: 778 DVHDELQNFDQHIKVLHAKAESLPQEAREHPDI 810
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
Frame = -2
Query: 247 EVHPSCQNFDP------AKAYSCPQASCEHPII 167
+VH QNFD AKA S PQ + EHP I
Sbjct: 778 DVHDELQNFDQHIKVLHAKAESLPQEAREHPDI 810
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
Frame = -2
Query: 247 EVHPSCQNFDP------AKAYSCPQASCEHPII 167
+VH QNFD AKA S PQ + EHP I
Sbjct: 778 DVHDELQNFDQHIKVLHAKAESLPQEAREHPDI 810
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 6/33 (18%)
Frame = -2
Query: 247 EVHPSCQNFDP------AKAYSCPQASCEHPII 167
+VH QNFD AKA S PQ + EHP I
Sbjct: 778 DVHDELQNFDQHIKVLHAKAESLPQEAREHPDI 810
>AF036706-17|AAK39277.2| 582|Caenorhabditis elegans Enhanced rnai
(rna interference)protein 1, isoform b protein.
Length = 582
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -3
Query: 342 EKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQ 187
EK +Y+ + EDF + + +FK G KS AR +I + V +
Sbjct: 427 EKMAIREYLENKQTEDFAKIAAERGIFKIGEIKSYQTARPIIEDDDVDVESE 478
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,272,504
Number of Sequences: 27780
Number of extensions: 272850
Number of successful extensions: 834
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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