Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303F01f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    46   8e-07
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   0.88 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.0  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       23   4.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   4.7  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 46.0 bits (104), Expect = 8e-07
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +1

Query: 412 KLRFDVSQYTPEEIVVKTVDNKLLVHAKHEEKSD 513
           ++  DV Q++PEEI VK VDN +LV  KHEEK D
Sbjct: 16  QINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQD 49


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 0.88
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +3

Query: 192 HQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQEH 296
           +++A R R E+D  +NE ++       ++Q  QEH
Sbjct: 204 NEQARREREEQDKMKNESLKSAQQHHSQKQAQQEH 238


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 181 EFSSIRERFDAEMRKMEEEMSKFRSELMNRESN 279
           E    R  +   +++ E+E++ FR+EL   E+N
Sbjct: 678 EMQKKRSEYSQLIQEHEKELADFRAELKQTEAN 710


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 379 LIQDEGDGKTLKLRFDVSQY-TPEEIVVKTVDNKL 480
           +I +  +G+TLK  +DV ++ T  ++V K  D  L
Sbjct: 1   MISEGAEGQTLKELYDVFKFPTDRDLVRKAFDVSL 35


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +3

Query: 186  LKHQRALRCRNEEDGRRNEQIQIRTHEQRKQQFLQEHN 299
            L+HQ   + + ++  ++ +Q Q   H+Q +Q  LQ H+
Sbjct: 1300 LQHQYQQQLQQQQQQQQQQQQQ---HQQHQQHQLQHHH 1334


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,981
Number of Sequences: 2352
Number of extensions: 7729
Number of successful extensions: 67
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)