Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303E10f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 224 1e-57
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 222 3e-57
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 175 4e-43
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 156 3e-37
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 151 9e-36
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 134 2e-30
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 133 3e-30
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 125 5e-28
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 125 7e-28
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 124 9e-28
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 109 5e-23
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 107 2e-22
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 103 2e-21
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 102 6e-21
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 97 2e-19
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 88 1e-16
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 87 2e-16
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 66 6e-10
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 62 7e-09
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 61 1e-08
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 60 3e-08
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 60 3e-08
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 60 4e-08
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 55 9e-07
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 54 2e-06
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 53 5e-06
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 52 1e-05
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 50 2e-05
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 49 7e-05
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 47 2e-04
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 40 0.026
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 40 0.026
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 40 0.046
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 39 0.080
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 38 0.18
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 37 0.32
UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2; ... 34 1.7
UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n... 33 3.0
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 4.0
UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia... 33 5.2
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 33 5.2
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 5.2
UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte ... 32 6.9
UniRef50_O50954 Cluster: Putative uncharacterized protein; n=3; ... 32 6.9
UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR fam... 32 6.9
UniRef50_UPI0000E24B4A Cluster: PREDICTED: hypothetical protein;... 32 9.2
UniRef50_Q1L966 Cluster: Novel protein similar to vertebrate ata... 32 9.2
UniRef50_A4W8P5 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
UniRef50_P17377 Cluster: Minor core protein lambda-3; n=65; Reov... 32 9.2
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 224 bits (547), Expect = 1e-57
Identities = 108/166 (65%), Positives = 129/166 (77%), Gaps = 6/166 (3%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
HGM LTTDKLR M KKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q
Sbjct: 104 HGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQ 163
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 162
++ IR KM II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+
Sbjct: 164 IKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKK 223
Query: 161 PRFEISKLMELHXXXXXXXXXXGDKS------ERPEGYEPPVQESV 42
PRF++S LMELH + +RPEGYEPPVQ SV
Sbjct: 224 PRFDLSSLMELHGDGGGKAAEVSTGAASGVVVDRPEGYEPPVQASV 269
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 222 bits (543), Expect = 3e-57
Identities = 108/164 (65%), Positives = 127/164 (77%), Gaps = 4/164 (2%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
HGMDLT DK+ M KKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH Q
Sbjct: 101 HGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQ 160
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 162
VR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+
Sbjct: 161 VRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKK 220
Query: 161 PRFEISKLMELHXXXXXXXXXXGD----KSERPEGYEPPVQESV 42
P+FE+ KLMELH GD K ER +GYEPPVQESV
Sbjct: 221 PKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 175 bits (427), Expect = 4e-43
Identities = 88/159 (55%), Positives = 113/159 (71%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
GMD TTDKLR + +KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+
Sbjct: 497 GMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQI 556
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 159
R IR+KM EI+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+LK P
Sbjct: 557 RQIRRKMREIMTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAP 616
Query: 158 RFEISKLMELHXXXXXXXXXXGDKSERPEGYEPPVQESV 42
+F++ KLME+H G K ERP + PV E V
Sbjct: 617 KFDLGKLMEVH---GDYSEDVGTKLERPA--DEPVAEGV 650
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 156 bits (378), Expect = 3e-37
Identities = 71/132 (53%), Positives = 100/132 (75%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
HG+D T+DKLR + +KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA +Q
Sbjct: 101 HGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQ 160
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 162
+RAIR+KM EII R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+
Sbjct: 161 IRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQ 220
Query: 161 PRFEISKLMELH 126
P+F++ L+ LH
Sbjct: 221 PKFDLGGLLALH 232
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 151 bits (366), Expect = 9e-36
Identities = 74/160 (46%), Positives = 103/160 (64%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
HGMDLT DKL M KWQ+ IEA++DVKTTDGY LR F I FT K Q+ YAQ T+
Sbjct: 27 HGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVIAFTKKQE-DQKSHAYAQTTR 85
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 162
++ +R ++ E++ R+V +L+ VV KLIPDSI +D I+PL +RKVKVLK+
Sbjct: 86 IKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKK 145
Query: 161 PRFEISKLMELHXXXXXXXXXXGDKSERPEGYEPPVQESV 42
P+ ++ +++ELH G+ RP+ YEPPV ++V
Sbjct: 146 PKLDLGRILELH--SEGKADEFGEGVPRPDHYEPPVVDAV 183
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 134 bits (323), Expect = 2e-30
Identities = 75/161 (46%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQHT 345
+GMDLT DK KWQ ++EA+ DVKT D Y+L +FC+G+T N + R+ AQ+
Sbjct: 86 YGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQ 144
Query: 344 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 165
QV I +I+ D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L+
Sbjct: 145 QVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQ 202
Query: 164 RPRFEISKLMELHXXXXXXXXXXGDKSERPEGYEPPVQESV 42
+P+ ++ KL ELH KS+R YEPPVQESV
Sbjct: 203 KPKLDLGKLPELHALGLHGSHR---KSDR---YEPPVQESV 237
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 133 bits (321), Expect = 3e-30
Identities = 64/135 (47%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQ 351
+G+D+T D+L M +KWQTLIEA +D KT DGY++RVF + FT K S S TCYA+
Sbjct: 104 YGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAK 163
Query: 350 HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 171
+QVRAIR+K+ IT + + E LI + K IEK I+PL+++ IRKVKV
Sbjct: 164 SSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKV 223
Query: 170 LKRPRFEISKLMELH 126
LKRP+ + +K+ EL+
Sbjct: 224 LKRPKLDATKIAELY 238
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 125 bits (302), Expect = 5e-28
Identities = 56/132 (42%), Positives = 90/132 (68%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
+G+D T DK+ M KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q
Sbjct: 100 YGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQ 159
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 162
++ IRKK+ EI+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KR
Sbjct: 160 IKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKR 219
Query: 161 PRFEISKLMELH 126
P+ + KL E +
Sbjct: 220 PKVDAQKLREFY 231
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 125 bits (301), Expect = 7e-28
Identities = 68/146 (46%), Positives = 96/146 (65%), Gaps = 14/146 (9%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
+GMDLT+DKLR + KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ ++
Sbjct: 100 YGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSR 159
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLI--------------PDSIAKDIEKACHGIYP 204
V+AIRKKM +I+T V++++L+ VV+ LI ++A+ I I+P
Sbjct: 160 VKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFP 219
Query: 203 LRDVCIRKVKVLKRPRFEISKLMELH 126
+ +V IRKVKVLK P+ + +KL EL+
Sbjct: 220 IHNVFIRKVKVLKTPKVDAAKLSELY 245
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 124 bits (300), Expect = 9e-28
Identities = 63/101 (62%), Positives = 75/101 (74%), Gaps = 4/101 (3%)
Frame = -1
Query: 332 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 153
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Query: 152 EISKLMELHXXXXXXXXXXGD----KSERPEGYEPPVQESV 42
E+ KLMELH GD K ER +GYE PVQESV
Sbjct: 171 ELGKLMELHGEGCSSGKATGDETGVKVERADGYELPVQESV 211
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 109 bits (261), Expect = 5e-23
Identities = 45/132 (34%), Positives = 85/132 (64%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
H M++TTDK+ + +KW T +E ++VKT DGY +R+F + FT + Q + CYA+
Sbjct: 104 HSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRL 163
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 162
V+ +R ++ ++I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V++
Sbjct: 164 VKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRT 223
Query: 161 PRFEISKLMELH 126
P+F+ L+ H
Sbjct: 224 PKFDAQALLSAH 235
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 107 bits (257), Expect = 2e-22
Identities = 48/118 (40%), Positives = 78/118 (66%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
GM+LT+DK + M KKW TLIEA D+ DG V RVF +G T + +KTCY +H+
Sbjct: 54 GMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDE 113
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 165
+ IRK M ++I +++ ++++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 114 KKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 103 bits (248), Expect = 2e-21
Identities = 47/97 (48%), Positives = 69/97 (71%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
HG+ LTTDKLR + KKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ Q
Sbjct: 103 HGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQ 162
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 231
++ IRK M +IT++ + EL + V+ L + K +
Sbjct: 163 IKKIRKIMNNLITKEAASRELTQFVDYLKKTNFQKKL 199
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 102 bits (244), Expect = 6e-21
Identities = 52/79 (65%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
Frame = -1
Query: 266 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD- 90
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH GD
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDSSSSGKAIGDE 60
Query: 89 ---KSERPEGYEPPVQESV 42
K ER EGYEPPVQESV
Sbjct: 61 TGAKVERAEGYEPPVQESV 79
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 97.5 bits (232), Expect = 2e-19
Identities = 44/119 (36%), Positives = 75/119 (63%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
HG+ LT DK+ + KKW TLIE ++ KT DGY L++F I + K + KT Y +Q
Sbjct: 97 HGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQ 156
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 165
RA+R+++ +II ++ N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 157 KRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 87.8 bits (208), Expect = 1e-16
Identities = 46/132 (34%), Positives = 73/132 (55%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
HGMD+T K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ +
Sbjct: 101 HGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRV 160
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 162
+R +R + E + ++ + +V KL + + +A I RDV IR+VKV+KR
Sbjct: 161 IRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKR 220
Query: 161 PRFEISKLMELH 126
PR + L +H
Sbjct: 221 PRNTMELLSTMH 232
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 87.4 bits (207), Expect = 2e-16
Identities = 43/120 (35%), Positives = 70/120 (58%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
GM LT DKL + +K++T+I+A++D KT DG++LR+F IGFT K + S + YA +
Sbjct: 98 GMRLTHDKLDSIMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKA 157
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 159
R +R M + +T + + ++ + + I +I + C I + V I KVKV+K P
Sbjct: 158 RQVRDVMIKALTDACEANGVEQLCKDFVDEKIENEIVEKCKQICQIESVYITKVKVIKAP 217
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 65.7 bits (153), Expect = 6e-10
Identities = 41/120 (34%), Positives = 68/120 (56%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
G +LTTD +R + K+ + I+AN+DV+T DG+V+RV FT K A+ +Q+
Sbjct: 84 GHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQM 134
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 159
+AIR+ M +I+ + + ++ + + I ++ I + IYPLR V IRK +V P
Sbjct: 135 QAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMP 194
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 62.1 bits (144), Expect = 7e-09
Identities = 32/57 (56%), Positives = 39/57 (68%), Gaps = 4/57 (7%)
Frame = -1
Query: 200 RDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD----KSERPEGYEPPVQESV 42
R +C++KVK+LK+P+FE+ KLMELH GD K ER EGYEPPVQESV
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGDSSSSGKAIGDETGAKVERAEGYEPPVQESV 119
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 61.3 bits (142), Expect = 1e-08
Identities = 41/128 (32%), Positives = 67/128 (52%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
G D+TTD +R M ++ ++ I+ +V+T+DGY +RV + ++ S KT
Sbjct: 88 GHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT-------- 139
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 159
IRKK+ E +T E V +I D +++ K IYP+R + IRK +VL P
Sbjct: 140 -EIRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFP 198
Query: 158 RFEISKLM 135
+I +L+
Sbjct: 199 EEKIVELV 206
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 60.1 bits (139), Expect = 3e-08
Identities = 39/126 (30%), Positives = 66/126 (52%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
G +LT D +R + K+ + I+AN+ V T DG+ +RV I T K A+ +Q+
Sbjct: 83 GHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQI 133
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 159
+IR+ M ++ + E +N+++ +A +I K IYPLR V I K +++ RP
Sbjct: 134 ESIRQIMINVVNKRGAELGFTEFINEVVTGKVASEIYKNTKNIYPLRRVEIGKSELVYRP 193
Query: 158 RFEISK 141
+K
Sbjct: 194 AVAAAK 199
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 60.1 bits (139), Expect = 3e-08
Identities = 36/120 (30%), Positives = 64/120 (53%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
G++LT D +R + +K + + A +VKT DG V+R+ +G T + +K+
Sbjct: 93 GLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTAQKS-------- 144
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 159
A+RKKM E + + + + + +++ ++A D+ I P+R V I K+KVLK P
Sbjct: 145 -AMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYP 203
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 59.7 bits (138), Expect = 4e-08
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
G L D +R + ++ + I+ IDV T DGY +RV + FT T A+ +Q
Sbjct: 77 GHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQ 127
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRKVKV 171
RAIRK+M ++I + + E + + + +SI + I++A IYP+R IRK +V
Sbjct: 128 RAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEV 187
Query: 170 LKRP 159
L+ P
Sbjct: 188 LEEP 191
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 55.2 bits (127), Expect = 9e-07
Identities = 35/123 (28%), Positives = 69/123 (56%)
Frame = -1
Query: 515 MDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 336
M++T D +R + ++ + ++A +DV+T DG +RV + T +S+ KT +Q +
Sbjct: 83 MEMTRDYIRSLVRRGTSRVDAILDVQTKDGVKMRVMALAVT----VSRIKT-----SQKK 133
Query: 335 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 156
AIR+ M +II+ + + + + + ++A +++ IYP++ V + K+KVL P
Sbjct: 134 AIRRIMFDIISEKAASLDFDTFIQQAVIGTMATEMQMQAKKIYPIKKVEVYKIKVL-TPT 192
Query: 155 FEI 147
EI
Sbjct: 193 TEI 195
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 54.0 bits (124), Expect = 2e-06
Identities = 37/118 (31%), Positives = 62/118 (52%)
Frame = -1
Query: 512 DLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 333
+LT + L + ++ + IE +DV T DGY LRV + FT + + KT +Q RA
Sbjct: 89 ELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQKRA 139
Query: 332 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 159
IR M +I+ ++ + + + + + +I K IYP+R V IRK+++L P
Sbjct: 140 IRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 52.8 bits (121), Expect = 5e-06
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
G +L D +R + ++ + + +V T DGY LRV + FT R+ C + +Q
Sbjct: 81 GHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQK 131
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRKVKV 171
AIRK M EI+ + S L E++ ++ S+A I+++ IYPLR V I K K+
Sbjct: 132 SAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAKSKL 191
Query: 170 LKRP 159
L P
Sbjct: 192 LWVP 195
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 51.6 bits (118), Expect = 1e-05
Identities = 32/118 (27%), Positives = 59/118 (50%)
Frame = -1
Query: 512 DLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 333
+LT D LR + ++ + +EA I V TTD Y +++ + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKA 133
Query: 332 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 159
IR+ M +++ + ++++ ++ ++ I IYPLR V I+K + RP
Sbjct: 134 IRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTLEARP 191
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 50.4 bits (115), Expect = 2e-05
Identities = 35/118 (29%), Positives = 59/118 (50%)
Frame = -1
Query: 512 DLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 333
+LT D LR + ++ + +EA+I V TTD Y +RV + T K A +Q +A
Sbjct: 83 ELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKA 133
Query: 332 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 159
IR+ M + + + V+ ++ +++ I IYPLR V I+K+ + RP
Sbjct: 134 IRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAIYGDAKLIYPLRRVEIQKLTLEARP 191
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 48.8 bits (111), Expect = 7e-05
Identities = 37/122 (30%), Positives = 56/122 (45%)
Frame = -1
Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
+GM+LT D +R + ++ + + DV T DG LR+ + T T T
Sbjct: 88 NGMELTRDYVRNLVRRGSSKVMVIKDVTTKDGGKLRMEVLAIT---------TYRCTRTH 138
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 162
IRK + + + + S+ +V I I D+ IYPLR V I K+KVL+
Sbjct: 139 KHLIRKSIMDRLDKVGQESDFDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVLEY 198
Query: 161 PR 156
PR
Sbjct: 199 PR 200
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 47.2 bits (107), Expect = 2e-04
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHT-Q 342
G +L+ D +R + ++ + I +D+ T DG+ LRV + T Y H Q
Sbjct: 89 GHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT----------AYRVHREQ 138
Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 162
IRK M +++ + E V ++I ++A +I I PLR I K KVL
Sbjct: 139 ATTIRKIMEDVVKKTAEGKTFDEFVQEMIFGNLANNIFNEAKKIAPLRKAEIEKSKVLFA 198
Query: 161 PRFEISK 141
P + K
Sbjct: 199 PLIKEGK 205
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 40.3 bits (90), Expect = 0.026
Identities = 29/113 (25%), Positives = 56/113 (49%)
Frame = -1
Query: 503 TDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK 324
T+ +R ++++ I+ IDV T DGY++R+ + T K Q + ++IR
Sbjct: 100 TNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIKPLIITQKR---------VQTSVKQSIRA 150
Query: 323 KMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 165
K +++ V + + ++ S+ +I+ IYP R V IRK ++L+
Sbjct: 151 KTRDVLLGYVAKTTYDALQVAMLDGSLETEIQNQIKTIYPCRSVVIRKSQLLQ 203
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 40.3 bits (90), Expect = 0.026
Identities = 32/119 (26%), Positives = 54/119 (45%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
G ++ D +R M ++ + I+ + KT DGY L V I + L+ K
Sbjct: 84 GHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRL-VIKIVLVSDSKLTANKR-------- 134
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 162
+R K+ I + L E+ +I D++ DI +YP++ + IRK +VL R
Sbjct: 135 GEVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEVLGR 193
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 39.5 bits (88), Expect = 0.046
Identities = 28/117 (23%), Positives = 56/117 (47%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
G TTD +R M ++ + I+A+ VKT D +++ + T + A+ +Q
Sbjct: 85 GHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKVKLHVLAVTTRR---------AKSSQQ 135
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 168
+ +R+ + +++ E++ ++ +A ++ IYPL+ V I K KVL
Sbjct: 136 KYMRQVINDLLAETAAEKSFDELIKLVVNGKLASEVYHNAKKIYPLKRVEIIKSKVL 192
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 38.7 bits (86), Expect = 0.080
Identities = 31/116 (26%), Positives = 53/116 (45%)
Frame = -1
Query: 518 GMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQV 339
G ++T D LR + K+ + I+ ++ V T D +R+ ++S A Q
Sbjct: 85 GHEVTRDYLRSLVKRRSSRIDCHVQVVTKDNKKVRL---------TISCYTFARANIAQE 135
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 171
A+R + + +L +VN ++ I+KD+ K +YP R V I K KV
Sbjct: 136 HALRNAITAGLVAQAQAWDLNTLVNGVVSGEISKDLFKLVKTLYPTRRVEIIKSKV 191
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 37.5 bits (83), Expect = 0.18
Identities = 32/125 (25%), Positives = 58/125 (46%)
Frame = -1
Query: 500 DKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKK 321
D +R + ++ + I+ DVKT+D ++ V + T+ + +K IRK
Sbjct: 91 DYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTKKF---------QIRKV 141
Query: 320 MCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISK 141
+ + I + E V LI D I D+ A IYPL+ + +RK +++ +S
Sbjct: 142 LTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSELV-----SLSG 196
Query: 140 LMELH 126
+ E+H
Sbjct: 197 ISEIH 201
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 36.7 bits (81), Expect = 0.32
Identities = 27/125 (21%), Positives = 57/125 (45%)
Frame = -1
Query: 512 DLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRA 333
+ + + LR + ++ + + +DVKT+DGYV R+ + T + + +K A
Sbjct: 86 EYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK---------HA 136
Query: 332 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 153
+R + ++I V + + V I DI + +R + + KVK+++
Sbjct: 137 LRLIIRDVIENTVPQMNIDQFVQAACYGKINSDILSRAKKLVKVRHMGLEKVKLVRTAEE 196
Query: 152 EISKL 138
+I+ L
Sbjct: 197 QITLL 201
>UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2;
cellular organisms|Rep: Surface repeat protein, putative
- Roseobacter sp. AzwK-3b
Length = 5954
Score = 34.3 bits (75), Expect = 1.7
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 69 ALRPFRLVSGFPLASTAFAVKFHQLR-DLETGPLQHFHLSDANIAQRVDAMAGLLDVLGN 245
AL RL + P+ V QL D+ TGP+ H + D Q V A GL+D+ GN
Sbjct: 5486 ALSVLRLGALVPVGPDGLGVALDQLDLDVTTGPV-HLNERDGIDLQSVIARDGLIDIFGN 5544
Query: 246 GV 251
G+
Sbjct: 5545 GL 5546
>UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n=2;
Eukaryota|Rep: Serine/threonine-protein kinase TEL1 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 2768
Score = 33.5 bits (73), Expect = 3.0
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +1
Query: 139 NFEISKRGLFNTFTFRMQTSRRG*MPWQAFSMSLAMESGINLFTTSLSSELVTSRVMISH 318
N + GLF TF RM T + M W ++++ +L T LSS L+ +R
Sbjct: 2010 NSSVEHYGLFKTFARRMSTIQSAKMLWSQNETVMSIDMLKDLLHTPLSSNLI-ARARKQP 2068
Query: 319 IFFLIALT*VCWA*HVLRWLKES 387
F +A+ + +++WL S
Sbjct: 2069 FFQQMAILDINVKAQLVQWLSHS 2091
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 4.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 294 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 401
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Predicted
protein, WF-1 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 128
Score = 32.7 bits (71), Expect = 5.2
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -1
Query: 317 CEIITRDVTNSELREVVNK---LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 150
CE + D+ N ++VNK + D + DI+ I +DV I VKV+ P+ E
Sbjct: 42 CEKVKSDLKNPAYEDIVNKDTQIQEDGLVVDIDNCYFYIKYPQDVIIEVVKVINSPKVE 100
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 32.7 bits (71), Expect = 5.2
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1
Query: 371 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 225
R CY + Q++ + + D TNSE+ +VNKL +SI K +K
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 5.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 284 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 132
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
>UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte
immunoglobulin-like receptor; n=2; Laurasiatheria|Rep:
PREDICTED: similar to leukocyte immunoglobulin-like
receptor - Equus caballus
Length = 618
Score = 32.3 bits (70), Expect = 6.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +2
Query: 134 PSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 259
P R A + P H RC+G PS P+ WSQ S
Sbjct: 175 PRIHHGRWQALFPVGPVNTSHGGTYRCYGSPSSYPYAWSQPS 216
>UniRef50_O50954 Cluster: Putative uncharacterized protein; n=3;
Borrelia burgdorferi group|Rep: Putative uncharacterized
protein - Borrelia burgdorferi (Lyme disease spirochete)
Length = 282
Score = 32.3 bits (70), Expect = 6.9
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = -1
Query: 479 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR-KTCYAQHTQVRAIRKKMCEIIT 303
+K QT I + +K + +L V+ I TN L ++ + A+ ++R T
Sbjct: 87 EKLQTEIPSQFGLKNSMFELLNVYKIDSTNGTRLQEKMNSSLAESQKMRRQFYSSLSYNT 146
Query: 302 RDVTNSELREVVNKLIPDSIAKD-IEKACHGI 210
D+ N L E+VNKL D A D I+K GI
Sbjct: 147 TDIFN--LAEIVNKLYKDPKAHDTIKKISGGI 176
>UniRef50_Q6M3X0 Cluster: Bacterial regulatory proteins, tetR
family; n=4; Corynebacterium|Rep: Bacterial regulatory
proteins, tetR family - Corynebacterium glutamicum
(Brevibacterium flavum)
Length = 191
Score = 32.3 bits (70), Expect = 6.9
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = -1
Query: 515 MDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLR-VFCIGFTNKDSLSQRKTCYAQHTQV 339
+++ L W K Q LI+A T Y+L V + S+S ++TC A+ +
Sbjct: 37 LNVAPGALYWHFKNKQELIDA------TSRYLLAPVLGRNDEQRASISAQETC-AEMRSL 89
Query: 338 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 228
K E+I+ ++N +LR+ + LI DS+ + E
Sbjct: 90 MMQTKDGAEVISAALSNQQLRQELESLISDSLKEPNE 126
>UniRef50_UPI0000E24B4A Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 446
Score = 31.9 bits (69), Expect = 9.2
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 134 PSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPW 241
PSTS S G + + G RA G C GR R W
Sbjct: 369 PSTSDSVCGRAEPAASLGAAQRAPGGCSGRRQRATW 404
>UniRef50_Q1L966 Cluster: Novel protein similar to vertebrate ataxin
1; n=1; Danio rerio|Rep: Novel protein similar to
vertebrate ataxin 1 - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 781
Score = 31.9 bits (69), Expect = 9.2
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +2
Query: 137 STSRSRNGASSTLSPFGCKHRAEGRCHGRP-SRCPWQWSQESTCSPPP*VQS 289
STS GAS L P H G C G+P SR S S PPP V +
Sbjct: 331 STSADSGGASDKLPPSTSHHEKGGICAGKPVSRSSSLSSSLSFALPPPPVDN 382
>UniRef50_A4W8P5 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sp. 638|Rep: Putative uncharacterized
protein - Enterobacter sp. 638
Length = 318
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/97 (18%), Positives = 42/97 (43%)
Frame = -1
Query: 488 WMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 309
++ K+ TL+ + K + +R+ F +K+ + C ++T + + +C+
Sbjct: 120 YLSKQGVTLL--TLTGKDEQQFTIRLCADAFLDKEGEATLAFCDRENTVLAEMTFTLCQF 177
Query: 308 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 198
+ + +P + + KACHG++P R
Sbjct: 178 EGKSTLFIGGMQGAKAFVPHELIQGATKACHGLFPKR 214
>UniRef50_P17377 Cluster: Minor core protein lambda-3; n=65;
Reoviridae|Rep: Minor core protein lambda-3 - Reovirus
type 2 (strain D5/Jones) (T2J) (Mammalian orthoreovirus
2)
Length = 1267
Score = 31.9 bits (69), Expect = 9.2
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -1
Query: 455 ANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELR 276
+ +DV D +LR+ +G K +Q Q ++ A+ K I+ +DV +L
Sbjct: 1117 SGLDVNAIDSALLRLRTLGADKKALTAQLLMVGLQESEADALAGK---IMLQDVNTVQLA 1173
Query: 275 EVVNKLIPDS 246
VVN +PD+
Sbjct: 1174 RVVNLAVPDT 1183
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 469,422,139
Number of Sequences: 1657284
Number of extensions: 9011527
Number of successful extensions: 26985
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 26232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26956
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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