Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303E10f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   221   2e-59
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.50 
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   3.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   4.7  
AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    23   8.2  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  221 bits (539), Expect = 2e-59
 Identities = 107/166 (64%), Positives = 127/166 (76%), Gaps = 6/166 (3%)
 Frame = -1

Query: 521 HGMDLTTDKLRWMXKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQ 342
           HGM LTTDKLR M  KWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q
Sbjct: 104 HGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQ 163

Query: 341 VRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 162
           ++ IR KM  II R++T+++L+ VV KL+PDSIAKDIEKAC  +YPL DV IRKVKVLK+
Sbjct: 164 IKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKK 223

Query: 161 PRFEISKLMELHXXXXXXXXXXGDKSE------RPEGYEPPVQESV 42
           PRF++S LMELH             +       RPEGYEPPVQ SV
Sbjct: 224 PRFDLSSLMELHGDGGGKAAEVSTGAASGVVVVRPEGYEPPVQASV 269


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 210 LPSARCLHPKGESVEEAPFRDLEVDGT 130
           +P   C H  G ++E+A    LE DGT
Sbjct: 557 MPPKGCSHDDGPALEKAQLYQLESDGT 583


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +3

Query: 180 LSDANIAQRVDAMAGLLDVLGNGVRNQLV 266
           L+ AN  QR++    L D++G+  RN+++
Sbjct: 560 LAIANALQRINTPKYLYDIIGDYFRNRVL 588


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = +2

Query: 155 NGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSP 271
           NG    +   G  H   G    RPSR    ++  S C P
Sbjct: 146 NGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRP 184


>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 329 RKKMCEIITRDVTNSELRE 273
           + K+  +IT+D+   ELRE
Sbjct: 106 KHKVLHVITKDIREHELRE 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,328
Number of Sequences: 2352
Number of extensions: 9883
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)