Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303E08f
         (472 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7P0R9 Cluster: Chromosome chr19 scaffold_4, whole geno...    32   5.5  
UniRef50_UPI0000E48CFA Cluster: PREDICTED: similar to serotonin ...    31   9.7  

>UniRef50_A7P0R9 Cluster: Chromosome chr19 scaffold_4, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr19 scaffold_4, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 2599

 Score = 32.3 bits (70), Expect = 5.5
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -1

Query: 388 VGNNQFKFWTLCRLPLHITKLASHQIL*PIYSNDSNCFIEL*QKI 254
           +GNN FK+W L R  LHI+ L   + + P +S    C +E  Q++
Sbjct: 779 IGNNSFKYWDLMR--LHISHLKGIKDVSPHFSPLIICVLEKCQRV 821


>UniRef50_UPI0000E48CFA Cluster: PREDICTED: similar to serotonin
           receptor; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to serotonin receptor -
           Strongylocentrotus purpuratus
          Length = 429

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 45  PFAI*WTLTFGVEDNSNVICYHADFGRNLF 134
           P A  W L  GVE NS  I +  ++G+N++
Sbjct: 164 PIATIWDLVVGVESNSQSIVFSPNYGKNVY 193


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,652,871
Number of Sequences: 1657284
Number of extensions: 9149132
Number of successful extensions: 15096
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15095
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)