Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303E08f
         (472 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316...    29   1.9  
03_01_0580 + 4293079-4293582,4293797-4294037,4294982-4295160,429...    28   4.4  

>12_02_0772 -
           23029703-23029715,23029835-23030463,23030637-23031673,
           23031830-23032166
          Length = 671

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +1

Query: 166 INIYQH-FGFKI---INYLETFFGDDIR*KILSEFSVITR*NNY 285
           I IYQH  G K+   I YLETF G+    K+L E  V    NNY
Sbjct: 454 ITIYQHNIGSKVEDMITYLETFLGESA--KVLWEQWVEKNPNNY 495


>03_01_0580 +
           4293079-4293582,4293797-4294037,4294982-4295160,
           4295319-4295674,4295761-4296100
          Length = 539

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 360 VQNLNWLFPTSFLYNYPFALLWYNIEFSQI 449
           V+ L+W+ P+  ++  PF  L+Y+  FSQ+
Sbjct: 259 VRTLHWVVPSYSIWGLPF-FLFYSTRFSQL 287


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,971,952
Number of Sequences: 37544
Number of extensions: 225522
Number of successful extensions: 352
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)