Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303E07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73425-6|CAB61014.1| 382|Caenorhabditis elegans Hypothetical pr... 218 2e-57
U94834-1|AAC47509.1| 378|Caenorhabditis elegans multiple exosto... 218 2e-57
AB241458-1|BAF48989.1| 382|Caenorhabditis elegans heparan sulfa... 218 2e-57
AL132860-9|CAB60524.1| 647|Caenorhabditis elegans Hypothetical ... 30 0.87
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical ... 29 2.7
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 3.5
U70853-2|AAM97995.1| 228|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL032623-14|CAA21518.1| 593|Caenorhabditis elegans Hypothetical... 27 6.2
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z73425-6|CAB61014.1| 382|Caenorhabditis elegans Hypothetical
protein F12F6.3 protein.
Length = 382
Score = 218 bits (533), Expect = 2e-57
Identities = 96/166 (57%), Positives = 128/166 (77%), Gaps = 1/166 (0%)
Frame = +2
Query: 26 WRNGRNHLIFNLYAGTWPDYAEDSLGFDPGEAILARASASEIMFREGFDISLPLFHKEHP 205
W NGRNHLIFN Y GT+PDY + +L FD GEA++ARAS+SE F + FD+SLPLFH+ HP
Sbjct: 120 WNNGRNHLIFNFYHGTFPDYDDHNLNFDTGEAMIARASSSENNFIKVFDVSLPLFHENHP 179
Query: 206 -EKGGVPPAATVNPFPAQRKHLVAFKGKRYVHGIGSETRNSLWHLHDGNNLILVTTCRHG 382
E + QRK+LV+FKGKRYV+GIGS TRN + HLH+G+++++VTTC+H
Sbjct: 180 YEIKESKSERNDDRIENQRKYLVSFKGKRYVYGIGSGTRNLVHHLHNGDDIVMVTTCKHN 239
Query: 383 KSWKDLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRF 520
W+ +D+RC+ DN EYD+++Y++LLANSTFC+V RGRRLGS+RF
Sbjct: 240 NDWQVYQDDRCQRDNDEYDRWEYDELLANSTFCLVPRGRRLGSFRF 285
>U94834-1|AAC47509.1| 378|Caenorhabditis elegans multiple exostoses
homolog 1 protein.
Length = 378
Score = 218 bits (533), Expect = 2e-57
Identities = 96/166 (57%), Positives = 128/166 (77%), Gaps = 1/166 (0%)
Frame = +2
Query: 26 WRNGRNHLIFNLYAGTWPDYAEDSLGFDPGEAILARASASEIMFREGFDISLPLFHKEHP 205
W NGRNHLIFN Y GT+PDY + +L FD GEA++ARAS+SE F + FD+SLPLFH+ HP
Sbjct: 116 WNNGRNHLIFNFYHGTFPDYDDHNLNFDTGEAMIARASSSENNFIKVFDVSLPLFHENHP 175
Query: 206 -EKGGVPPAATVNPFPAQRKHLVAFKGKRYVHGIGSETRNSLWHLHDGNNLILVTTCRHG 382
E + QRK+LV+FKGKRYV+GIGS TRN + HLH+G+++++VTTC+H
Sbjct: 176 YEIKESKSERNDDRIENQRKYLVSFKGKRYVYGIGSGTRNLVHHLHNGDDIVMVTTCKHN 235
Query: 383 KSWKDLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRF 520
W+ +D+RC+ DN EYD+++Y++LLANSTFC+V RGRRLGS+RF
Sbjct: 236 NDWQVYQDDRCQRDNDEYDRWEYDELLANSTFCLVPRGRRLGSFRF 281
>AB241458-1|BAF48989.1| 382|Caenorhabditis elegans heparan sulfate
polymerase protein.
Length = 382
Score = 218 bits (533), Expect = 2e-57
Identities = 96/166 (57%), Positives = 128/166 (77%), Gaps = 1/166 (0%)
Frame = +2
Query: 26 WRNGRNHLIFNLYAGTWPDYAEDSLGFDPGEAILARASASEIMFREGFDISLPLFHKEHP 205
W NGRNHLIFN Y GT+PDY + +L FD GEA++ARAS+SE F + FD+SLPLFH+ HP
Sbjct: 120 WNNGRNHLIFNFYHGTFPDYDDHNLNFDTGEAMIARASSSENNFIKVFDVSLPLFHENHP 179
Query: 206 -EKGGVPPAATVNPFPAQRKHLVAFKGKRYVHGIGSETRNSLWHLHDGNNLILVTTCRHG 382
E + QRK+LV+FKGKRYV+GIGS TRN + HLH+G+++++VTTC+H
Sbjct: 180 YEIKESKSERNDDRIENQRKYLVSFKGKRYVYGIGSGTRNLVHHLHNGDDIVMVTTCKHN 239
Query: 383 KSWKDLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRF 520
W+ +D+RC+ DN EYD+++Y++LLANSTFC+V RGRRLGS+RF
Sbjct: 240 NDWQVYQDDRCQRDNDEYDRWEYDELLANSTFCLVPRGRRLGSFRF 285
>AL132860-9|CAB60524.1| 647|Caenorhabditis elegans Hypothetical
protein Y56A3A.12a protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.87
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -2
Query: 115 TWVKSQRIFSIVWPS 71
TW SQRIFS++WP+
Sbjct: 8 TWSPSQRIFSLIWPA 22
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +2
Query: 206 EKGGVPPAATVNPF-----PAQRKHLVAFKGKRYVHGIGSETRNSLWHLHDGNNLILVTT 370
EKG PP + +N + A H +++ S RN LW+ G + L ++
Sbjct: 569 EKGDTPPYSIINNYFSIGVDASIAHRFHVMREKFPEKFNSRMRNKLWYFELGTSETLSSS 628
Query: 371 CRH 379
C++
Sbjct: 629 CKN 631
>Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical
protein C38H2.1 protein.
Length = 863
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +2
Query: 317 RNSLWHLHDGNNLILVTTCR--HGKSWKDLRDERCEEDNKEYDKFDY 451
R L HL D LI C K WK R E EE+ KE+ K Y
Sbjct: 494 RTHLLHLVDTKTLICDDDCDPVDEKFWKQARAEPTEENEKEFLKRVY 540
>AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical
protein ZC416.1 protein.
Length = 139
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 317 RNSLWHLHDGNNLILVTTCRHGKS-WKDLRDERCEEDNKE 433
RNS W+ N L TT H K+ WK LRD +E+ KE
Sbjct: 77 RNSAWNEIAEN---LETTSEHVKTRWKTLRDRYKKEEKKE 113
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 440 CHILYCPLHIFHLLNLSKIFHDGKWLLRSSYFHHVNATKNYGFHYQY 300
C + CPL +L + IFHD K+ + H N ++YG+ Y
Sbjct: 136 CEAMLCPLERVQVLLQTTIFHD-KF---KNTLHTFNRLRDYGYREYY 178
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 440 CHILYCPLHIFHLLNLSKIFHDGKWLLRSSYFHHVNATKNYGFHYQY 300
C + CPL +L + IFHD K+ + H N ++YG+ Y
Sbjct: 45 CEAMLCPLERVQVLLQTTIFHD-KF---KNTLHTFNRLRDYGYREYY 87
>U70853-2|AAM97995.1| 228|Caenorhabditis elegans Hypothetical
protein M01H9.5 protein.
Length = 228
Score = 28.3 bits (60), Expect = 3.5
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +2
Query: 191 HKEHPEKGGVPPAA---TVNPFPAQRKHLVAFKGKRYVHGIGSETRNSLWHLHDGNNLIL 361
HKE PE+ PP T NP P K L KR+V +G H GN ++
Sbjct: 129 HKETPERLSTPPGMIINTENPIPHLSKKLK--NAKRHVKFVGKARARR----HIGNVVVE 182
Query: 362 VTTCRH 379
C H
Sbjct: 183 SGQCDH 188
>Z73899-5|CAA98080.1| 372|Caenorhabditis elegans Hypothetical
protein ZK829.7 protein.
Length = 372
Score = 27.9 bits (59), Expect = 4.7
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +2
Query: 50 IFNLYAGTW---PDYAEDSLGFDPGEAILARASASEIMFREGFDISLPLFHKEHPEKGGV 220
+ NL AG PDY + D A+L + S SE+ R ++ P + + GGV
Sbjct: 307 LVNLIAGGQIDAPDYRVYPV--DQASAVLKQLSMSEVEGRAILEVCDPSSALDADQSGGV 364
Query: 221 P-PAAT 235
P PAAT
Sbjct: 365 PIPAAT 370
>Z83234-2|CAB70170.2| 715|Caenorhabditis elegans Hypothetical
protein K09E4.4 protein.
Length = 715
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 175 NVKSLTKHYFGSTCSGQYSFTW 110
N +S YFG+ C+ YSF W
Sbjct: 129 NFESKQIRYFGNMCTFSYSFAW 150
>Z69634-2|CAA93451.2| 926|Caenorhabditis elegans Hypothetical
protein B0001.2 protein.
Length = 926
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +2
Query: 176 SLPLFHKEHPEKGGVPPAATVNPFPAQRKHLVAFKGKRYVHGIGSETRNSLWHLHD 343
S P+ HK KG P +T NP +R + + K H G E LW L D
Sbjct: 450 SEPVIHK----KGFKPLISTENPLVLKRAVITSLKPNNGKHLYGKEKIAFLWLLDD 501
>AL032623-14|CAA21518.1| 593|Caenorhabditis elegans Hypothetical
protein Y43F8B.14 protein.
Length = 593
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 344 GNNLILVTTCRHGKSWKDLRDERCEEDNKEYDKFD 448
G L++V T SWK L + E+D+ D FD
Sbjct: 278 GKTLLVVPTTDAMTSWKKLLESLLEKDDLSIDYFD 312
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
F42C5.10 protein.
Length = 1292
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -1
Query: 443 TCHILYCPLHIFHLLNLSKIFH--DGKWLLRSSYFHHVNA 330
T + Y P+H+ H+ NL+K+F+ D K L + V+A
Sbjct: 1126 TTSLDYQPVHVGHVKNLAKLFNKPDEKPLTTEQVIYRVSA 1165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,144,951
Number of Sequences: 27780
Number of extensions: 271852
Number of successful extensions: 781
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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