Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303E04f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    24   0.71 
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   1.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   1.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   1.6  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = -3

Query: 162 FSIQVTSRIIVIFFSQLPKRTFQRRTRPPVVQPEVD--IEKVQRGDSKYTKRNE 7
           F  +V  R +  FF  L     Q+R    +V+P++   + + ++G  K+   NE
Sbjct: 189 FEYRVLPRKVTDFFEGLILDNMQKREAEKIVRPDLIHLLMEARKGKLKHDNSNE 242



 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 296 FFSFRVLYTRI*NYFCGIIL 355
           FF +RVL  ++ ++F G+IL
Sbjct: 188 FFEYRVLPRKVTDFFEGLIL 207


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -1

Query: 101 PSRG--GQDLRSYSLRWTSKRFSVEILNTLNGT 9
           P++G  G+D R+    W S R    I+  L  T
Sbjct: 51  PAQGILGRDFRAIHFTWASARVGYTIVTILGAT 83



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 304 FSRVIYTHLKLLLRYNLAL 360
           F ++ Y+H+  L+ YN+ +
Sbjct: 194 FGKMSYSHIFSLMDYNIVM 212


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -1

Query: 101 PSRG--GQDLRSYSLRWTSKRFSVEILNTLNGT 9
           P++G  G+D R+    W S R    I+  L  T
Sbjct: 51  PAQGILGRDFRAIHFTWASARVGYTIVTILGAT 83



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 304 FSRVIYTHLKLLLRYNLAL 360
           F ++ Y+H+  L+ YN+ +
Sbjct: 194 FGKMSYSHIFSLMDYNIVM 212


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = -1

Query: 101 PSRG--GQDLRSYSLRWTSKRFSVEILNTLNGT 9
           P++G  G+D R+    W S R    I+  L  T
Sbjct: 51  PAQGILGRDFRAIHFTWASARVGYTIVTILGAT 83



 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 304 FSRVIYTHLKLLLRYNLAL 360
           F ++ Y+H+  L+ YN+ +
Sbjct: 194 FGKMSYSHIFSLMDYNIVM 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,407
Number of Sequences: 336
Number of extensions: 2827
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)