Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303E02f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731...    30   1.3  
09_04_0213 + 15706638-15707915                                         29   3.0  
06_01_0181 - 1404688-1404792,1405504-1405608                           28   4.0  
08_02_0959 - 23055078-23055177,23055408-23055985                       27   6.9  
10_01_0034 - 414654-415649,416654-417007                               27   9.1  
07_03_0762 + 21324550-21325414,21325606-21325746,21325993-213261...    27   9.1  

>02_05_1303 +
           35572403-35572624,35572744-35572860,35572987-35573112,
           35573217-35573279,35573837-35573944,35574587-35574664,
           35574772-35574864,35575206-35575292,35575429-35575530,
           35575617-35575736,35575839-35575901,35575974-35576119,
           35576203-35576296,35576399-35576457,35576568-35576607,
           35576694-35576785,35576877-35576946,35578172-35578333,
           35578477-35578703,35578863-35579070,35579173-35579258,
           35579450-35579541,35579674-35579870
          Length = 883

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 16/69 (23%), Positives = 31/69 (44%)
 Frame = +1

Query: 157 SIVSFWEFFVSVGAFALLIPNDAVSLGRLLRVCVPFLVSVFPPASXRPALVWQRALLGAR 336
           ++   WE +    A+ L +P    S   + +  VP+L ++    S +  L + R   G+ 
Sbjct: 637 ALEDLWEHYAESSAYGLAVPVRLESGNTITQHFVPYLSAIQIYTSTKSLLAFSRGSAGSE 696

Query: 337 PPPPSDDAS 363
               SDD++
Sbjct: 697 SDSWSDDST 705


>09_04_0213 + 15706638-15707915
          Length = 425

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +1

Query: 139 FTAPSLSIVSFWEFFVSVGAFALL 210
           FT+ SLS  SFW  F+  GA +LL
Sbjct: 284 FTSDSLSFGSFWGLFLITGATSLL 307


>06_01_0181 - 1404688-1404792,1405504-1405608
          Length = 69

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 415 LDKLK-RFKLSKEALAKCEKRRQKVAEAW 332
           LD+L  R K  KEA   CEK ++K  E W
Sbjct: 29  LDQLDLRMKNLKEAKCACEKEKRKAEERW 57


>08_02_0959 - 23055078-23055177,23055408-23055985
          Length = 225

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 514 PPETERVMLVSLALGPDGGGDELRPLLQLVF 422
           PP T  + +  + L  DGG + L P+L L+F
Sbjct: 149 PPPTVTMTVPDMELHFDGGANMLHPILSLLF 179


>10_01_0034 - 414654-415649,416654-417007
          Length = 449

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 307 VWQRALLGARPPPPSDDASRT 369
           VW+R +L +R PPP+  A+ T
Sbjct: 165 VWERHILTSRSPPPTIGATNT 185


>07_03_0762 +
           21324550-21325414,21325606-21325746,21325993-21326177,
           21326200-21326410,21326526-21326769,21326853-21327003,
           21327089-21327439
          Length = 715

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +1

Query: 235 GRLLRVCVPFLVSVFPPASXRPALVWQRALLGARPPPPSDDAS 363
           G +  V   F   VFP  S RP L+   A +   PPPPS  A+
Sbjct: 245 GGMFGVWCNFRYEVFPFFSGRP-LLQLPAFVETPPPPPSPSAT 286


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,897,418
Number of Sequences: 37544
Number of extensions: 124384
Number of successful extensions: 642
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)