Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303E01f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    30   0.041
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    28   0.17 
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   4.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.2  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 30.3 bits (65), Expect = 0.041
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -3

Query: 285 SLIVTTSTLSYSVLIPSKLLQGLTLAYKSNSFLR 184
           S+  TT++  +S L+PS  + GL++   ++SFLR
Sbjct: 92  SITTTTTSTCHSHLLPSLAITGLSIGSSNSSFLR 125


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -3

Query: 285 SLIVTTSTLSYSVLIPSKLLQGLTLAYKSNSFLR 184
           S+  TT++  +S L+PS  + GL++   ++ FLR
Sbjct: 92  SITTTTTSTCHSHLLPSLAITGLSIGSSNSRFLR 125


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 87  GIPNLPSGPLTAVTSTSSHSI 25
           G P +P+GP  + T+ S +SI
Sbjct: 251 GCPTIPAGPSKSATNHSINSI 271


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 154  DWSHQGTLQANFIG 113
            DWS  GT  A FIG
Sbjct: 2786 DWSQPGTWNALFIG 2799


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,526
Number of Sequences: 2352
Number of extensions: 9017
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)