Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303D12f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 235 3e-61
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 182 6e-45
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 175 4e-43
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 175 7e-43
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 127 1e-28
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 124 9e-28
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 118 6e-26
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 115 8e-25
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 109 3e-23
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 105 5e-22
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 103 2e-21
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 101 8e-21
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 99 5e-20
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 87 3e-16
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 85 7e-16
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 82 7e-15
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 75 8e-13
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 65 1e-09
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ... 62 7e-09
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl... 61 2e-08
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 59 7e-08
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 50 4e-05
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 49 7e-05
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;... 48 1e-04
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:... 47 3e-04
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya... 44 0.002
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo... 42 0.006
UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1; Ostreo... 42 0.009
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.026
UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2; Thermoprot... 40 0.026
UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1; Archae... 40 0.035
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy... 39 0.060
UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1; Encepha... 38 0.14
UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA hel... 33 4.0
UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 5.2
UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2; Desulf... 33 5.2
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 235 bits (576), Expect = 3e-61
Identities = 114/124 (91%), Positives = 115/124 (92%)
Frame = -3
Query: 405 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 226
MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+R
Sbjct: 1 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVR 60
Query: 225 VDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 46
VDTRLNKFLWSKGVRNVPF RNDDEDSAHKLFTLVTYVPVASIKGLQTENVD
Sbjct: 61 VDTRLNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 120
Query: 45 ASQE 34
ASQE
Sbjct: 121 ASQE 124
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 182 bits (442), Expect = 6e-45
Identities = 84/120 (70%), Positives = 101/120 (84%), Gaps = 1/120 (0%)
Frame = -3
Query: 402 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 226
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 225 VDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 46
+DTRLNK +W+KG+RNVP+ RN+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 175 bits (427), Expect = 4e-43
Identities = 81/124 (65%), Positives = 100/124 (80%)
Frame = -3
Query: 405 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 226
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 225 VDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 46
+DTRLNK +WSKG+R+ PF RNDDEDS +KL+T VTYVPV++ K LQTENV+
Sbjct: 61 IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120
Query: 45 ASQE 34
+S +
Sbjct: 121 SSDD 124
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 175 bits (425), Expect = 7e-43
Identities = 81/124 (65%), Positives = 102/124 (82%)
Frame = -3
Query: 405 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 226
MAK K E+K KSAINEVVTRE T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R
Sbjct: 1 MAKTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVR 60
Query: 225 VDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 46
+DTRLNK LW +G+RN PF RNDDEDS +KL+TLVTYVPV++ K LQTENV+
Sbjct: 61 IDTRLNKALWHRGIRNPPFRIRVRLSRRRNDDEDSPNKLYTLVTYVPVSTFKELQTENVE 120
Query: 45 ASQE 34
++++
Sbjct: 121 STED 124
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 127 bits (307), Expect = 1e-28
Identities = 62/116 (53%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
Frame = -3
Query: 387 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 208
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LN
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60
Query: 207 KFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 46
K +WSKG+R P RNDDED+ + F+LVT +P + GL T+ ++
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIE 116
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 124 bits (300), Expect = 9e-28
Identities = 62/119 (52%), Positives = 82/119 (68%), Gaps = 1/119 (0%)
Frame = -3
Query: 399 KPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 220
K + +K +SA+N+VVTREYTVNLHKR+H V FKKRAPRAIKE+ FA+K MGT D+R+D
Sbjct: 55 KSQKGKKTRSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKDVRLD 114
Query: 219 TRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFT-LVTYVPVASIKGLQTENVD 46
+LN+ +W GV+N P RNDDE + KL+T V + + + KGLQT +D
Sbjct: 115 PKLNQEVWKYGVKNFPRRLRVRLERKRNDDEGAKEKLYTYAVPVLGLGTAKGLQTTVID 173
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 118 bits (285), Expect = 6e-26
Identities = 48/61 (78%), Positives = 59/61 (96%)
Frame = -3
Query: 351 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 172
TREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP
Sbjct: 60 TREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVP 119
Query: 171 F 169
+
Sbjct: 120 Y 120
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 115 bits (276), Expect = 8e-25
Identities = 51/85 (60%), Positives = 67/85 (78%)
Frame = -3
Query: 300 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDS 121
+K RA+K+IRKFA K++GTPD+R+DTRLNK +W+KG+RNVP+ RN+DEDS
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDS 148
Query: 120 AHKLFTLVTYVPVASIKGLQTENVD 46
+KL+TLVTYVPV ++K LQT NVD
Sbjct: 149 PNKLYTLVTYVPVTTLKNLQTVNVD 173
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 109 bits (263), Expect = 3e-23
Identities = 52/79 (65%), Positives = 61/79 (77%)
Frame = -3
Query: 282 AIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFT 103
A IRKFA K+MGTPD+R+DTRLNK +WSKGVRNVP+ RN+DEDS +KL+T
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNKAVWSKGVRNVPYRMRVRLSRKRNEDEDSPNKLYT 70
Query: 102 LVTYVPVASIKGLQTENVD 46
LVTYVPV + KGLQT NVD
Sbjct: 71 LVTYVPVTTCKGLQTVNVD 89
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 105 bits (253), Expect = 5e-22
Identities = 48/99 (48%), Positives = 66/99 (66%)
Frame = -3
Query: 339 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXX 160
TVNLHK+ H + FKK+APRAI+EI A+K MGT D+R+DT LNKF+WS G+RN+P
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIPRRVR 71
Query: 159 XXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDA 43
+N++E + + +TLV ++ V S GL TE A
Sbjct: 72 VRLCKRKNEEEGAQSQFYTLVQHLQVDSYHGLLTEKTKA 110
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 103 bits (247), Expect = 2e-21
Identities = 50/99 (50%), Positives = 66/99 (66%)
Frame = -3
Query: 351 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 172
T+ T+NL K H V +K++APRAIKEI+ A K M T D+R+D +LNKF+WSKG+RN P
Sbjct: 39 TKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNKFIWSKGIRNPP 98
Query: 171 FXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTE 55
RN+DEDS +++TLV +V V S KGL E
Sbjct: 99 KRVRVKIERVRNEDEDSKERMYTLVQHVMVDSYKGLVNE 137
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 101 bits (243), Expect = 8e-21
Identities = 50/97 (51%), Positives = 66/97 (68%)
Frame = -3
Query: 354 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 175
VTR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK +W+KG NV
Sbjct: 25 VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84
Query: 174 PFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGL 64
+ N + + HKL+TL+TYVPV + K L
Sbjct: 85 SW---VPICGFENMMKLNIHKLYTLITYVPVTTFKNL 118
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 99.1 bits (236), Expect = 5e-20
Identities = 54/126 (42%), Positives = 76/126 (60%)
Frame = -3
Query: 414 KITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP 235
K+ KP E K K +TRE T+++HK LH FKKRAP+AIK IR A K M T
Sbjct: 28 KVGNKKPSKEIKAKEMAP--ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTH 85
Query: 234 DIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTE 55
+++ D LN+F+WS+G+R+V + E+ K +TLV+YVPVAS KGL T+
Sbjct: 86 NVKFDMGLNQFIWSQGIRSVADRIRVRMARLPMEGEEG--KFYTLVSYVPVASFKGLVTK 143
Query: 54 NVDASQ 37
V+ ++
Sbjct: 144 TVEETE 149
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 86.6 bits (205), Expect = 3e-16
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = -3
Query: 402 AKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 223
AK G++KG SAINE+VTREYT+N+HKR+H VGFK AP A+KEI KFA K MGTP+ +
Sbjct: 4 AKKGGKKKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVI 63
Query: 222 DT 217
T
Sbjct: 64 CT 65
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
(RPL31C) - Arabidopsis thaliana
Length = 85
Score = 85.4 bits (202), Expect = 7e-16
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = -3
Query: 387 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 220
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 82.2 bits (194), Expect = 7e-15
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = -3
Query: 360 EVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVR 181
+ V+ E T++L K L F KRAP AIK I+ F + M T D R+D LN ++W KGV+
Sbjct: 82 DAVSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLNTYIWHKGVK 141
Query: 180 NVPFXXXXXXXXXRNDDEDSAHK-LFTLVTYVPVASIKGLQTENVD 46
VP E + HK +T+++ VPVAS KGL T+ V+
Sbjct: 142 GVPGRVRVLIQRKSETTEGNKHKHFYTVISNVPVASFKGLTTKTVE 187
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 75.4 bits (177), Expect = 8e-13
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = -3
Query: 306 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVR-NVPFXXXXXXXXXRNDD 130
GF++ P +KEIRKFA K+MGTPD+ +D NK + ++G+R NVP +D
Sbjct: 49 GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEGIRNNVPHRIPVRLSRKCKED 108
Query: 129 EDSAHKLFTLVTYVPVAS 76
EDS +KL+ LVT VPV +
Sbjct: 109 EDSPNKLYRLVTCVPVTT 126
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 64.9 bits (151), Expect = 1e-09
Identities = 38/99 (38%), Positives = 54/99 (54%)
Frame = -3
Query: 345 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFX 166
E T++L K +H + RA RAIK I A+K M T +++D LN +W G +N P
Sbjct: 34 ETTIHLQKAVHNTTRRFRAERAIKVITAAAKKMMHTEVVKIDPELNSRIWIHG-KNCPPA 92
Query: 165 XXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENV 49
+ D+ED A K+ T+ +Y VAS GLQT+ V
Sbjct: 93 RVRVVFERKADEED-AEKMVTIASYKNVASFNGLQTQKV 130
>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
Saccharomyces cerevisiae|Rep: Putative uncharacterized
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 77
Score = 62.1 bits (144), Expect = 7e-09
Identities = 36/61 (59%), Positives = 39/61 (63%)
Frame = +2
Query: 176 TFLTPLDQRNLFKRVSTRMSGVPICFSANFRISLIALGARFLNPTP*SRLCKLTVYSRVT 355
T LT L Q F + R S VP+C ANF ISL ALGA FL TP + LCKL VYSRVT
Sbjct: 17 TPLTLLFQIAWFNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRVT 76
Query: 356 T 358
T
Sbjct: 77 T 77
>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
ATCC 50803
Length = 106
Score = 60.9 bits (141), Expect = 2e-08
Identities = 38/100 (38%), Positives = 52/100 (52%)
Frame = -3
Query: 354 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 175
+ E+T+ L+K + G KK AP AI+ IR EK D+R+D +N F+WS+G+R+V
Sbjct: 3 IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVNVFVWSRGIRHV 62
Query: 174 PFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTE 55
P DDE HK F V V + K L TE
Sbjct: 63 P-RRIRLEVRLEGDDE---HK-FAYVINKDVENFKHLTTE 97
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 58.8 bits (136), Expect = 7e-08
Identities = 28/82 (34%), Positives = 46/82 (56%)
Frame = -3
Query: 300 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDS 121
KKR + + A K M T D+R+D LN+ +W++G+RN+P + +++D
Sbjct: 286 KKRPQKLSLILLISARKNMLTEDVRIDPSLNEAVWARGIRNLPRRIRVRLQRKKKEEDDG 345
Query: 120 AHKLFTLVTYVPVASIKGLQTE 55
K +TL +VPV + GL+TE
Sbjct: 346 KGKYYTLAQHVPVDTFDGLKTE 367
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 49.6 bits (113), Expect = 4e-05
Identities = 21/59 (35%), Positives = 37/59 (62%)
Frame = -3
Query: 348 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 172
R YT+ L ++ KRAPRAIK+I++F ++ M +++D LN+ +W +G++ P
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQKPP 67
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
theta|Rep: 60S ribosomal protein L31 - Guillardia theta
(Cryptomonas phi)
Length = 97
Score = 48.8 bits (111), Expect = 7e-05
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = -3
Query: 333 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 172
N+HKR+ G F KR AIKEI+KFA K +IR++ LN + S G N P
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELNMQICSNGSSNPP 68
>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L31E - Ignicoccus hospitalis KIN4/I
Length = 101
Score = 48.0 bits (109), Expect = 1e-04
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = -3
Query: 342 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKFLWSKGVRNVPF 169
YT+NL +RL+ RA RA++ +R+F + G D+++D +N +LWS + P
Sbjct: 10 YTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWSGSITKPPA 68
Query: 168 XXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQ 61
E+ K V YV +A++K ++
Sbjct: 69 RVQVYVTVKTESGEEGERK----VAYVTLANVKDVE 100
>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
NEQ364 - Nanoarchaeum equitans
Length = 79
Score = 46.8 bits (106), Expect = 3e-04
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = -3
Query: 345 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 172
EYTVNL K + KR +A+K +++F + +++ LNKF+W +G R P
Sbjct: 2 EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNKFIWKRGGRKPP 59
>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 93
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = -3
Query: 378 GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNK 205
GK A + V + YT+ L + + V KRA RA+KE+R F + M T +++D +N+
Sbjct: 3 GKMADDMVKEQIYTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61
Query: 204 FLWSKGVRNVP 172
LW KG P
Sbjct: 62 CLWEKGCEKPP 72
>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L31e -
Pyrococcus furiosus
Length = 95
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -3
Query: 342 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 172
+TV + K V KRAPRA+K +R+F + ++ +D ++N+ +W +G+ P
Sbjct: 11 FTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPP 67
>UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1;
Ostreococcus tauri|Rep: 60S ribosomal protein L31a -
Ostreococcus tauri
Length = 95
Score = 41.9 bits (94), Expect = 0.009
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 246 MGTPDIRVDTRLNKFLWSKGVRNVPF 169
M T D+R+D +LNK +WSKG+RNV F
Sbjct: 1 MKTSDVRIDVKLNKAVWSKGIRNVRF 26
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 40.3 bits (90), Expect = 0.026
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -3
Query: 363 NEVVTREYTVNLHKRLHG 310
+EVVTREYT+NLHKRLHG
Sbjct: 13 DEVVTREYTINLHKRLHG 30
>UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2;
Thermoprotei|Rep: Ribosomal protein L31E - Cenarchaeum
symbiosum
Length = 217
Score = 40.3 bits (90), Expect = 0.026
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = -3
Query: 348 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 172
R YT+ L K L +RA RAI I++FA M +IR+D ++ +W +G+++ P
Sbjct: 7 RVYTIPLGKVLLSPD-NRRAMRAINMIKEFATHHMKNANIRIDEEVSHQIWLRGIKSPP 64
>UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L31e -
Archaeoglobus fulgidus
Length = 88
Score = 39.9 bits (89), Expect = 0.035
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -3
Query: 357 VVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP--DIRVDTRLNKFLWSKGV 184
VV R Y++ L ++ RA +A K +RKF + M ++++DT +N+ +W +G
Sbjct: 5 VVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWERGA 64
Query: 183 RNVP 172
P
Sbjct: 65 EKPP 68
>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L31e - Aeropyrum
pernix
Length = 104
Score = 39.1 bits (87), Expect = 0.060
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = -3
Query: 342 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 172
Y VNL +R++ +RA RA++ +R+F + ++ +D LN ++WS+ P
Sbjct: 9 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREKPP 64
>UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L31
- Encephalitozoon cuniculi
Length = 111
Score = 37.9 bits (84), Expect = 0.14
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -3
Query: 372 SAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP-DIRVDTRLNKFLW 196
S I E T E TVNL + + + K+A + ++ +++ +K + V LN FL+
Sbjct: 3 SKIEENQTVEMTVNLRRICSRLPWTKKASKVVRMLKREIQKHFREEIGVVVTNDLNNFLY 62
Query: 195 SKGVRNVP 172
S+G++ +P
Sbjct: 63 SRGIKKIP 70
>UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA
helicase ruvA; n=6; Actinomycetales|Rep: Holliday
junction ATP-dependent DNA helicase ruvA - Streptomyces
avermitilis
Length = 203
Score = 33.1 bits (72), Expect = 4.0
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -3
Query: 420 KLKITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKR-APRAIKEIRKFAEKQM 244
+LK + +P G G AI VT + LH L G+G+ R A A+ + AE
Sbjct: 126 ELKDRLGEPLGT--GGPAIGRAVTTGWREQLHAALIGLGYATREADEAVAAVAPQAEAAG 183
Query: 243 GTPDI 229
GTP +
Sbjct: 184 GTPQV 188
>UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 3; n=1; Solibacter usitatus Ellin6076|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 3 -
Solibacter usitatus (strain Ellin6076)
Length = 202
Score = 32.7 bits (71), Expect = 5.2
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 342 YTV-NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWS 193
YT + KRL G G +R + E R F E+ T D+RVD +WS
Sbjct: 31 YTAAEIPKRLAGTGLVERFETGLMEPRDFVEEMSRTLDLRVDYDQFSQIWS 81
>UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L31e -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 102
Score = 32.7 bits (71), Expect = 5.2
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -3
Query: 354 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD-IRVDTRLNKFLWSKGVRN 178
+TR V KR++ RA RA++ IRK+ + + I +D +N+++WS+
Sbjct: 7 ITRSIHVIPLKRVYWGRRTNRADRAVRLIRKYVRRHFKEAEKIIIDPAVNEYVWSRSREK 66
Query: 177 VP 172
P
Sbjct: 67 PP 68
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,932,002
Number of Sequences: 1657284
Number of extensions: 8782013
Number of successful extensions: 17191
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 16838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17185
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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