Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303D12f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 182 9e-46
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 182 9e-46
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 182 9e-46
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 182 9e-46
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 182 9e-46
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 180 3e-45
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 170 2e-42
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 54 2e-07
AK027230-1|BAB15700.1| 668|Homo sapiens protein ( Homo sapiens ... 30 4.3
AB051557-1|BAB21861.1| 1307|Homo sapiens KIAA1770 protein protein. 30 4.3
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 182 bits (442), Expect = 9e-46
Identities = 84/120 (70%), Positives = 101/120 (84%), Gaps = 1/120 (0%)
Frame = -3
Query: 402 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 226
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 225 VDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 46
+DTRLNK +W+KG+RNVP+ RN+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 182 bits (442), Expect = 9e-46
Identities = 84/120 (70%), Positives = 101/120 (84%), Gaps = 1/120 (0%)
Frame = -3
Query: 402 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 226
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 225 VDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 46
+DTRLNK +W+KG+RNVP+ RN+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 182 bits (442), Expect = 9e-46
Identities = 84/120 (70%), Positives = 101/120 (84%), Gaps = 1/120 (0%)
Frame = -3
Query: 402 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 226
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 225 VDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 46
+DTRLNK +W+KG+RNVP+ RN+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 182 bits (442), Expect = 9e-46
Identities = 84/120 (70%), Positives = 101/120 (84%), Gaps = 1/120 (0%)
Frame = -3
Query: 402 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 226
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 225 VDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 46
+DTRLNK +W+KG+RNVP+ RN+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 182 bits (442), Expect = 9e-46
Identities = 84/120 (70%), Positives = 101/120 (84%), Gaps = 1/120 (0%)
Frame = -3
Query: 402 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 226
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 225 VDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 46
+DTRLNK +W+KG+RNVP+ RN+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 180 bits (438), Expect = 3e-45
Identities = 83/119 (69%), Positives = 100/119 (84%), Gaps = 1/119 (0%)
Frame = -3
Query: 399 KPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 223
K GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+
Sbjct: 1 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 60
Query: 222 DTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 46
DTRLNK +W+KG+RNVP+ RN+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 61 DTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 119
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 170 bits (414), Expect = 2e-42
Identities = 78/112 (69%), Positives = 95/112 (84%), Gaps = 1/112 (0%)
Frame = -3
Query: 402 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 226
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 225 VDTRLNKFLWSKGVRNVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIK 70
+DTRLNK +W+KG+RNVP+ RN+DEDS +KL+TLVTYVPV + K
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK 115
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 54.4 bits (125), Expect = 2e-07
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = -3
Query: 180 NVPFXXXXXXXXXRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 46
NVP+ RN+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 1 NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45
>AK027230-1|BAB15700.1| 668|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23577 fis, clone LNG12640. ).
Length = 668
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 494 PRAEFGTRDFLDILTVLF*VEFGTRNLR*QWLNPKVKEKANQP*TKLLPVNIQLIYTNDF 315
P+ G + F DIL L + GT N W++ + + Q T LL VN + + F
Sbjct: 327 PKGIIGNKAFTDILIDLVTLNLGTNNFPSNWMH--LTQPELQEITSLLTVNSEFVDWRKF 384
Query: 314 MVL 306
+++
Sbjct: 385 LLV 387
>AB051557-1|BAB21861.1| 1307|Homo sapiens KIAA1770 protein protein.
Length = 1307
Score = 30.3 bits (65), Expect = 4.3
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 494 PRAEFGTRDFLDILTVLF*VEFGTRNLR*QWLNPKVKEKANQP*TKLLPVNIQLIYTNDF 315
P+ G + F DIL L + GT N W++ + + Q T LL VN + + F
Sbjct: 965 PKGIIGNKAFTDILIDLVTLNLGTNNFPSNWMH--LTQPELQELTSLLTVNSEFVDWRKF 1022
Query: 314 MVL 306
+++
Sbjct: 1023 LLV 1025
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,716,382
Number of Sequences: 237096
Number of extensions: 1303367
Number of successful extensions: 7335
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7335
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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