Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303D12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              23   1.4  
AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...    22   3.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.7  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = +2

Query: 425 YRIQLRKELSECQG---SPSCRIRHEASCRCY-ELS 520
           YR +++K +SEC+G     +C   +  + +CY ELS
Sbjct: 104 YRAEVQKAISECKGIAKGDNCEYAYRFN-KCYAELS 138


>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 429 RYTKLKITMAKPKG 388
           RY+KLK    KPKG
Sbjct: 26  RYSKLKRNWRKPKG 39


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +2

Query: 356 TSFMADLPFLSPLGLAIVILSFVYRIQLRKELSECQGSP 472
           T F A   FLS L  A+++    +RI  R  L   +  P
Sbjct: 7   TGFSASSVFLSLLIPALILYFIYFRISRRHLLELAEKIP 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,186
Number of Sequences: 438
Number of extensions: 2669
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)