Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303D10f
(495 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 184 1e-45
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 180 2e-44
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 164 8e-40
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 161 8e-39
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 147 1e-34
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 145 5e-34
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 141 7e-33
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 139 3e-32
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 136 2e-31
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 134 8e-31
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 117 2e-25
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 116 4e-25
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 116 4e-25
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 113 2e-24
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 109 4e-23
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 100 2e-20
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 89 5e-17
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 75 1e-12
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 75 1e-12
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 71 1e-11
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 60 2e-08
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 60 4e-08
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 57 2e-07
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 56 4e-07
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 53 3e-06
UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarc... 48 9e-05
UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9; Euryarc... 48 1e-04
UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular org... 43 0.004
UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4; Thermop... 43 0.004
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 42 0.010
UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687; ... 36 0.38
UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;... 36 0.50
UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Re... 36 0.50
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 0.66
UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella ve... 36 0.66
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 35 1.1
UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1; ... 34 2.0
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 34 2.0
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 33 2.7
UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia... 33 3.5
UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2; ... 33 3.5
UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor; ... 33 3.5
UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 4.6
UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA meth... 33 4.6
UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;... 32 6.1
UniRef50_A0BK90 Cluster: Chromosome undetermined scaffold_111, w... 32 6.1
UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya C... 32 8.1
UniRef50_Q6T4R4 Cluster: Transcription factor Hox1; n=3; Enterop... 32 8.1
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 184 bits (448), Expect = 1e-45
Identities = 85/109 (77%), Positives = 94/109 (86%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 259
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 260 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 406
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK W
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 108
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 180 bits (437), Expect = 2e-44
Identities = 89/140 (63%), Positives = 100/140 (71%)
Frame = +2
Query: 74 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 253
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXX 433
AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNV 120
Query: 434 XXXXXXXXXXXXXTGVPTLV 493
+GVP LV
Sbjct: 121 NQRRYALVSAIAASGVPALV 140
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 164 bits (399), Expect = 8e-40
Identities = 80/135 (59%), Positives = 89/135 (65%)
Frame = +2
Query: 89 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 268
+RP VSV S T G PLP VF +PIRPD+V VH M+KN RQPY VS++AGHQT
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVSEKAGHQT 61
Query: 269 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXXXXX 448
SAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPTK W
Sbjct: 62 SAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTKVWRKWHQKINLGQKRF 121
Query: 449 XXXXXXXXTGVPTLV 493
+GVP L+
Sbjct: 122 ATVSALAASGVPALL 136
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 161 bits (391), Expect = 8e-39
Identities = 75/98 (76%), Positives = 83/98 (84%)
Frame = +2
Query: 107 VYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG 286
VY++KSE + LP VF+AP+RPD+V+ VH + KN RQPY VS EAGHQTSAESWG
Sbjct: 127 VYNDKSEPTDTQIR-LPGVFRAPLRPDIVSFVHDQIRKNKRQPYAVSVEAGHQTSAESWG 185
Query: 287 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 400
TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 186 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 223
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 147 bits (356), Expect = 1e-34
Identities = 71/104 (68%), Positives = 80/104 (76%)
Frame = +2
Query: 89 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 268
ARP VSVYS S++V G PLP VF APIR D+V VH +M+KNSRQ Y V++ +G
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVNRLSGMNH 61
Query: 269 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 400
SA SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRMFAPTK
Sbjct: 62 SAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTK 105
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 145 bits (351), Expect = 5e-34
Identities = 73/138 (52%), Positives = 86/138 (62%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 259
++ ARP+VSV+ T ++ PLP VF +P+R DLV V +MSKN RQ Y VS +AG
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVSTKAG 60
Query: 260 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWXXXXXXXXXXX 439
HQ SAESWGTGRAVARIPRV GT RSGQGAFGNMCRGG MF+P K +
Sbjct: 61 HQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKINTTE 120
Query: 440 XXXXXXXXXXXTGVPTLV 493
TG P+LV
Sbjct: 121 KRHAVAAAIAATGCPSLV 138
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 141 bits (342), Expect = 7e-33
Identities = 66/109 (60%), Positives = 79/109 (72%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 259
++ RPL +VY + V G + +P VF+ PIR DL+ + +MSKN R PY V AG
Sbjct: 1 MATIRPLANVYGINGKKVVGEVE-IPVVFQTPIRHDLIEYIFSNMSKNIRHPYAVKLGAG 59
Query: 260 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 406
++TSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG MF PTK W
Sbjct: 60 YETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTKIW 108
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 139 bits (337), Expect = 3e-32
Identities = 63/107 (58%), Positives = 80/107 (74%)
Frame = +2
Query: 86 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 265
V RP+VSV+S +E G+ +P VF P+R DLV+ VH +MSKN RQ Y +S+ +G+Q
Sbjct: 2 VHRPVVSVFSVSTEKRMGSTI-MPRVFSTPLRSDLVHYVHTNMSKNKRQAYAISRMSGYQ 60
Query: 266 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 406
TSA SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G MFAPT+ W
Sbjct: 61 TSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTW 107
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 136 bits (330), Expect = 2e-31
Identities = 66/105 (62%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Frame = +2
Query: 95 PLVSVYSEKSET-VQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 271
PLVSV+S T V PLP VF+ PIRPD+V+ VH +++KN RQ + V+ +AG Q S
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQAGMQHS 64
Query: 272 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 406
AESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K W
Sbjct: 65 AESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVW 109
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 134 bits (325), Expect = 8e-31
Identities = 63/105 (60%), Positives = 77/105 (73%)
Frame = +2
Query: 92 RPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTS 271
RP VSV++ GA +P VF AP+R DLV VH +MSKN RQ Y VSK +G+QTS
Sbjct: 4 RPEVSVHNATDGERVGATL-MPKVFSAPLRLDLVRIVHTNMSKNRRQAYAVSKMSGYQTS 62
Query: 272 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 406
A SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M+APT+ W
Sbjct: 63 ARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVW 107
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 117 bits (281), Expect = 2e-25
Identities = 58/104 (55%), Positives = 73/104 (70%)
Frame = +2
Query: 89 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 268
+RP V++Y + + LP VF APIR D+V+ V+ + SKN+RQP VS +AG Q
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVSTKAGKQH 62
Query: 269 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 400
SA SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G MF+P K
Sbjct: 63 SAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLK 106
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 116 bits (278), Expect = 4e-25
Identities = 54/85 (63%), Positives = 61/85 (71%)
Frame = +2
Query: 152 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 331
+P VF + IR D+V VH +M KN RQ Y VS AG TSA SWGTGRAV+R+PRV G G
Sbjct: 19 IPKVFFSKIRVDIVRFVHKNMCKNKRQVYAVSSTAGMGTSAVSWGTGRAVSRVPRVPGSG 78
Query: 332 THRSGQGAFGNMCRGGRMFAPTKPW 406
THRSGQGA N CRGGR+F PT W
Sbjct: 79 THRSGQGAIANFCRGGRIFNPTTIW 103
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 116 bits (278), Expect = 4e-25
Identities = 57/100 (57%), Positives = 66/100 (66%)
Frame = +2
Query: 101 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 280
++ Y TV+ LP VF PIR DLV + +RQPY VSK AG Q SAES
Sbjct: 5 INCYEADGVTVKKTLD-LPEVFSVPIRQDLVLKTYSLYRMKTRQPYAVSKNAGMQHSAES 63
Query: 281 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 400
WGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM PTK
Sbjct: 64 WGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTK 103
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 113 bits (272), Expect = 2e-24
Identities = 53/103 (51%), Positives = 70/103 (67%)
Frame = +2
Query: 98 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 277
L +VY+ + A P + +PIRPD+V+ VH++++KN RQP+ AGHQ SAE
Sbjct: 7 LTTVYNTDGKARDTTAVPSVIRY-SPIRPDVVHFVHMNLAKNERQPFGRYYLAGHQHSAE 65
Query: 278 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPW 406
SWGTGRAVAR+PR+ G GT R+GQ AF N RGG M++P K W
Sbjct: 66 SWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVW 108
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 109 bits (261), Expect = 4e-23
Identities = 47/63 (74%), Positives = 53/63 (84%)
Frame = +2
Query: 218 KNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 397
++++ V +AGHQTSAESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRMFAPT
Sbjct: 22 ESTKDTLTVPNKAGHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPT 81
Query: 398 KPW 406
K W
Sbjct: 82 KVW 84
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 100 bits (240), Expect = 2e-20
Identities = 46/103 (44%), Positives = 71/103 (68%)
Frame = +2
Query: 86 VARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 265
++R V+V +++ + + + LP VF PIR ++V +V+V+++KN++QP+ AG +
Sbjct: 1 MSRQTVNVLTQEGQ--KASTIELPKVFDTPIRAEVVKEVYVNLAKNAQQPHANDPMAGKK 58
Query: 266 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAP 394
SA SWGTGRA A +PRV G G++R+GQGA+ N CRGG F P
Sbjct: 59 VSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNP 101
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 89.0 bits (211), Expect = 5e-17
Identities = 48/101 (47%), Positives = 57/101 (56%)
Frame = +2
Query: 95 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 274
P V V+ V A P P VF P+RPD++N VH + K R PY VS+ AG Q +A
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVSRYAGVQCTA 60
Query: 275 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPT 397
SWG GRAVAR+PR G G GA+ N RGG M PT
Sbjct: 61 HSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHPT 95
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 74.5 bits (175), Expect = 1e-12
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2
Query: 185 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 331
D+VN VH ++ KN QPY VS+ AG+QTSAESWGTGRA +PRVRGGG
Sbjct: 25 DVVNFVHSNLHKNDSQPYAVSESAGYQTSAESWGTGRARGPMPRVRGGG 73
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 74.5 bits (175), Expect = 1e-12
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +2
Query: 254 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMF 388
+G+Q SA+SWG GR +ARIPR++G GT ++GQGA NMCRGGR+F
Sbjct: 59 SGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRLF 103
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 70.9 bits (166), Expect = 1e-11
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = +2
Query: 95 PLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 274
P+ ++ E+ +TV+ LP F+ P+R DL+ ++ N RQPY AG +TSA
Sbjct: 4 PVFNLEGEEVDTVE-----LPSFFEEPVRKDLIRRAVLAAQANRRQPYGTDPRAGFRTSA 58
Query: 275 ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGG-RMFAPT--KPW 406
ESWG G VA +PRV+G +G+ A GG + APT K W
Sbjct: 59 ESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPTPEKDW 105
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 60.5 bits (140), Expect = 2e-08
Identities = 38/101 (37%), Positives = 51/101 (50%)
Frame = +2
Query: 98 LVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAE 277
+V VY E+ LP +F+ P+R DL+ +S QP AG +TSA
Sbjct: 15 IVPVYDERGGEKDSVV--LPQIFRFPVRKDLIRRAFLSEFTARLQPKGRDPMAGKRTSAV 72
Query: 278 SWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 400
S G GR VAR+PR++G S + A NM RGGR P +
Sbjct: 73 SLGVGRGVARVPRIKG-----SLRAALVNMARGGRAAHPPR 108
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 59.7 bits (138), Expect = 4e-08
Identities = 35/100 (35%), Positives = 53/100 (53%)
Frame = +2
Query: 101 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 280
++VYS K + + LP +F+ RPD++ +SM QP+ AG +T+AES
Sbjct: 4 INVYSLKGDITEEIE--LPEIFEEEYRPDVIKRAVISMQTARIQPWGTDPMAGKRTTAES 61
Query: 281 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 400
+G+GR A +PRV+G S + AF GGR P +
Sbjct: 62 FGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 57.2 bits (132), Expect = 2e-07
Identities = 34/82 (41%), Positives = 42/82 (51%)
Frame = +2
Query: 155 PFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 334
P F PIRPDL+ ++S QP V + AG + S ES+G G +ARIPR +G
Sbjct: 45 PLHFLEPIRPDLIRRAYLSALSARFQPKGVYEGAGKEHSCESFGVGLGIARIPRYKGSLW 104
Query: 335 HRSGQGAFGNMCRGGRMFAPTK 400
R G F RGGR P K
Sbjct: 105 PR---GCFAPNTRGGRRAHPPK 123
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 56.0 bits (129), Expect = 4e-07
Identities = 31/81 (38%), Positives = 44/81 (54%)
Frame = +2
Query: 152 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 331
LP +F P+R DL+ V ++ +S QP AG +TSAES+G +AR+PRV+
Sbjct: 25 LPIIFSFPVRKDLIRRVFIAEFTHSLQPKGRDPNAGKRTSAESFGINLGMARVPRVK--- 81
Query: 332 THRSGQGAFGNMCRGGRMFAP 394
SG+ A GGR+ P
Sbjct: 82 --NSGEAALAPNTVGGRLAFP 100
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 53.2 bits (122), Expect = 3e-06
Identities = 33/91 (36%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 134 QGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWG--TGRAVAR 307
+G LP VF P R DL+ + + + QP AG SA+S TG AR
Sbjct: 12 KGKEITLPPVFGTPYRRDLIKKAYTILDTHHFQPKGTHPTAGMDVSADSLNPPTGHGQAR 71
Query: 308 IPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 400
I R++GGG R G+ RGGR P K
Sbjct: 72 IARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_P12735 Cluster: 50S ribosomal protein L4P; n=1; Haloarcula
marismortui|Rep: 50S ribosomal protein L4P - Haloarcula
marismortui (Halobacterium marismortui)
Length = 246
Score = 48.4 bits (110), Expect = 9e-05
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +2
Query: 152 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRG 325
LP VF+ P+R DL+ + N +Q Y + AG +T AES+G+GR A +P+ G
Sbjct: 18 LPDVFETPVRSDLIGKAVRAAQANRKQDYGSDEYAGLRTPAESFGSGRGQAHVPKQDG 75
>UniRef50_O28355 Cluster: 50S ribosomal protein L4P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Archaeoglobus fulgidus
Length = 252
Score = 48.0 bits (109), Expect = 1e-04
Identities = 28/84 (33%), Positives = 40/84 (47%)
Frame = +2
Query: 152 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGG 331
LP VF RPD++ +++ + RQPY + +G S E+WG G AR+PR + G
Sbjct: 18 LPEVFAEEFRPDIIKRAVLALQSHRRQPYGPNPLSGVDYSWENWGPGHGYARVPRWKLG- 76
Query: 332 THRSGQGAFGNMCRGGRMFAPTKP 403
+ GGR P KP
Sbjct: 77 ----RRAVVVPQAVGGRRAHPPKP 96
>UniRef50_Q673S8 Cluster: Ribosomal protein L4; n=3; cellular
organisms|Rep: Ribosomal protein L4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 304
Score = 42.7 bits (96), Expect = 0.004
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +2
Query: 125 ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK-------EAGHQTSAESW 283
E G A LP VF IR DL+ ++ N RQ Y + +AG + S E W
Sbjct: 41 EAKNGKAVTLPDVFSGEIREDLIRRAVLASRANRRQSYGHREHDGKRKPQAGMKHSVEWW 100
Query: 284 GTGRAVARIPRVRGGGT 334
G GR V+RI R G T
Sbjct: 101 GKGRGVSRIMRKAGQRT 117
>UniRef50_Q9HIR0 Cluster: 50S ribosomal protein L4P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L4P -
Thermoplasma acidophilum
Length = 255
Score = 42.7 bits (96), Expect = 0.004
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +2
Query: 101 VSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 280
V +YS E ++G LP VF +R D++ ++S + RQPY S AG + +
Sbjct: 5 VPIYSVSGE-MKGEID-LPEVFDTEVREDIIRRAFRAISLSMRQPYGSSPLAGMRRVGHT 62
Query: 281 WGTGRAVARIPRVRGG 328
G ++R+PR+ GG
Sbjct: 63 TRPGLGISRMPRIAGG 78
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 41.5 bits (93), Expect = 0.010
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 328 WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQP 432
W VR C+R HV WW +VR E L LAP QP
Sbjct: 134 WNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_Q6ZR89 Cluster: CDNA FLJ46551 fis, clone THYMU3038687;
n=1; Homo sapiens|Rep: CDNA FLJ46551 fis, clone
THYMU3038687 - Homo sapiens (Human)
Length = 189
Score = 36.3 bits (80), Expect = 0.38
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Frame = +1
Query: 289 WTCCRPNSACPWW-----WYS*VRSGCLR*HVSWWTYVRPHEALAALAPSRQPPTAESGL 453
WT CR +AC W W++ V +GC W + H R+P E L
Sbjct: 79 WTGCRSTAACSRWRGCRPWWASVCTGCRSCVQRWRNSHQDHVLWGGPPEPRRPVGVERSL 138
Query: 454 GGSRCCYRRPNARS 495
G+ C P RS
Sbjct: 139 HGAPSCLSTPAPRS 152
>UniRef50_Q00UB0 Cluster: Ribosomal protein RPL1/RPL2/RL4L4; n=1;
Ostreococcus tauri|Rep: Ribosomal protein
RPL1/RPL2/RL4L4 - Ostreococcus tauri
Length = 404
Score = 35.9 bits (79), Expect = 0.50
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 137 GAAKPLPFVFKAPIRPDLVNDVHVSMSKN 223
GA+ +P VF +PIR D+VN VH ++KN
Sbjct: 15 GASCAMPEVFLSPIRADIVNAVHTGLAKN 43
>UniRef50_Q9VDD2 Cluster: CG17299-PF, isoform F; n=18; Diptera|Rep:
CG17299-PF, isoform F - Drosophila melanogaster (Fruit
fly)
Length = 1400
Score = 35.9 bits (79), Expect = 0.50
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Frame = +2
Query: 128 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 301
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 302 ARIPRVRGGGTHRSGQGAFGNMCRGGRM 385
+ GG +GQGA G GG M
Sbjct: 729 SSAAGGAGGAAAAAGQGAAGG--AGGLM 754
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 0.66
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 302 ARIPRVRGGGTHRSGQGAFGNMCRGG 379
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A7SGS6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 263
Score = 35.5 bits (78), Expect = 0.66
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 386 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 252
TY+ H Y +HP T+ YHH H + ++ Q+P + H + P
Sbjct: 114 TYLTHR--YHQHPQVTHRYHHQ-HPQVTHRYHQHPQVTHRYHQHP 155
Score = 33.9 bits (74), Expect = 2.0
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 362 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 252
Y +HP T+ YHH R H Q P I H + P
Sbjct: 75 YHQHPQVTHRYHHQHPQVTYRYHHQQPQITHRYHQHP 111
Score = 33.1 bits (72), Expect = 3.5
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -2
Query: 386 TYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 249
T + +++HP T+ YHH H + ++ Q+P + H + Q P
Sbjct: 3 TPTSYSQLFQQHPQVTHHYHHQ-HPQVTHRYHQHPQVTHRYQYQHP 47
Score = 31.9 bits (69), Expect = 8.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 377 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 249
HH Y +HP T+ Y+H R H Q+P + + + Q P
Sbjct: 62 HH---YHQHPQVTHRYYHQHPQVTHRYHHQHPQVTYRYHHQQP 101
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 34.7 bits (76), Expect = 1.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 374 HDTCYRRHPDRTYEYHHHGHAEFGRQH 294
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_UPI000023E82F Cluster: hypothetical protein FG01599.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01599.1 - Gibberella zeae PH-1
Length = 1347
Score = 33.9 bits (74), Expect = 2.0
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 383 YVHHD-TCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 270
Y H+D Y +H D + HHHG +G H + +H
Sbjct: 478 YDHNDYNYYHKHHDNKHYDHHHGDKHYGHHHEHHKHYEH 516
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 33.9 bits (74), Expect = 2.0
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 272 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 382
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 33.5 bits (73), Expect = 2.7
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 359 RRHPDRTYEYHHHGHAEFGRQHVQ-YPMIQHWF 264
R PD + +HHHGH G HV+ YP F
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYPATDSLF 213
>UniRef50_Q7QNZ3 Cluster: GLP_149_9791_7437; n=2; Giardia lamblia
ATCC 50803|Rep: GLP_149_9791_7437 - Giardia lamblia ATCC
50803
Length = 784
Score = 33.1 bits (72), Expect = 3.5
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 83 SVARPLVSVYSEKS--ETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 256
SVA P VYS+++ T +P P + + P ++ V + + + S+ PY +S+ +
Sbjct: 350 SVASP--PVYSDRAPHSTDFQRLRPAPLLPQTPSSDSNISLVTLPLGQESKDPYSLSRTS 407
Query: 257 GHQTSAESWGTGRAVARIPR 316
Q SA + R A+ PR
Sbjct: 408 LSQNSATTTNEFRVSAKTPR 427
>UniRef50_A4RCN1 Cluster: Putative uncharacterized protein; n=2;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 578
Score = 33.1 bits (72), Expect = 3.5
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -2
Query: 392 GRTYVH-HDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQ 255
GR++ H H TC +HP + +HHH H H P H + D+
Sbjct: 455 GRSHNHDHHTC-GQHPSHHHHHHHHHHCSVSHSVHCDDPNHHHEYEDE 501
>UniRef50_P04196 Cluster: Histidine-rich glycoprotein precursor;
n=19; Eutheria|Rep: Histidine-rich glycoprotein
precursor - Homo sapiens (Human)
Length = 525
Score = 33.1 bits (72), Expect = 3.5
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 377 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 246
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
>UniRef50_A5UPY3 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 1; n=2; Roseiflexus|Rep: HAD-superfamily
hydrolase, subfamily IA, variant 1 - Roseiflexus sp.
RS-1
Length = 223
Score = 32.7 bits (71), Expect = 4.6
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 161 RTGGA-WLHPAPSHSSLSTPTLKVGLPIDSFRYFSEAIPP 45
R GG WLH A SH P +++GLP+ E +PP
Sbjct: 163 RIGGLRWLHAAQSHFHDVVPAVQMGLPVAWINRKHEPLPP 202
>UniRef50_A3UKR0 Cluster: Probable C-5 cytosine-specific DNA
methylase; n=1; Oceanicaulis alexandrii HTCC2633|Rep:
Probable C-5 cytosine-specific DNA methylase -
Oceanicaulis alexandrii HTCC2633
Length = 681
Score = 32.7 bits (71), Expect = 4.6
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +2
Query: 137 GAAKPLPFVFKAPIRPDLVNDVHVS----MSKNSRQPYCVSKEAGHQTSAESWGTGRAVA 304
G + F++K P +PD + HV+ +N+ +P+ + E H +A G A
Sbjct: 427 GEEDNVTFLYKHPAQPDALQVAHVAPHIMTMRNAGKPFTAANEPTHTVTAGGAGLSLVAA 486
Query: 305 RIPRVRGGGTHRSGQG 352
+ + GG S G
Sbjct: 487 FMAQHNGGANMESHAG 502
>UniRef50_A1HES9 Cluster: Putative uncharacterized protein; n=1;
Ralstonia pickettii 12J|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 453
Score = 32.7 bits (71), Expect = 4.6
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 218 KNSRQPYCVSKEAGH-QTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMC-RGGRM 385
+N+ P V+KEAGH Q +A G V R+ + GTH G+G GN RGG +
Sbjct: 49 ENAHGPQHVAKEAGHLQAAAFGNGLDHQVGRVADI-SVGTHEHGRG--GNRAQRGGAL 103
>UniRef50_A0GGU8 Cluster: Putative uncharacterized protein; n=1;
Burkholderia phytofirmans PsJN|Rep: Putative
uncharacterized protein - Burkholderia phytofirmans PsJN
Length = 753
Score = 32.7 bits (71), Expect = 4.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 389 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 297
R + HHD C R R ++HHHGH GR+
Sbjct: 478 RDHHHHDRCLRDR--RRRDHHHHGHRLRGRR 506
Score = 31.9 bits (69), Expect = 8.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 389 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQ 297
R + HHD + +H R ++HHHGH GR+
Sbjct: 443 RDHHHHD--HHQHDRRLRDHHHHGHRLRGRR 471
>UniRef50_UPI0000F200AE Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 1756
Score = 32.3 bits (70), Expect = 6.1
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +2
Query: 89 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPD---LVNDVHVSMSKNSRQPYCVSKEAG 259
ARP ++ Y + G ++PLP AP +P ++D+ + P+ ++ +G
Sbjct: 475 ARPKITSYPQNRRPAGGLSRPLPSPGAAPSKPHHILTISDLEDTRRPRRHSPH--TQNSG 532
Query: 260 HQTSAESWGTGRAVARIPRVRGGGTH 337
++ S G IP R GG+H
Sbjct: 533 TRSHMTSPTLGSPAGPIPS-RAGGSH 557
>UniRef50_A0BK90 Cluster: Chromosome undetermined scaffold_111, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_111, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1552
Score = 32.3 bits (70), Expect = 6.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 73 NESIGSPTFSVGVLREE*DGAGCSQAPPVRVQGAHPSGPGQ 195
NES+G T S+ + + G + PP +++ +HP+ PGQ
Sbjct: 1425 NESLGEATMSLKPIIKRLSRDGKYEMPPTKIKLSHPNYPGQ 1465
>UniRef50_UPI0000DB70FB Cluster: PREDICTED: similar to achintya
CG8819-PA, isoform A; n=2; Endopterygota|Rep: PREDICTED:
similar to achintya CG8819-PA, isoform A - Apis
mellifera
Length = 447
Score = 31.9 bits (69), Expect = 8.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2
Query: 362 YRRHPDRTYEYHHHGHAEFGRQHVQY 285
YRRH + YHHH H R H +Y
Sbjct: 53 YRRHYRNDHHYHHHHHHYHHRHHHRY 78
>UniRef50_Q6T4R4 Cluster: Transcription factor Hox1; n=3;
Enteropneusta|Rep: Transcription factor Hox1 -
Ptychodera flava
Length = 334
Score = 31.9 bits (69), Expect = 8.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -2
Query: 377 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 249
HHD + HP + H H H + +QH Q I H D P
Sbjct: 158 HHDQHHHHHPQQQQPPHSHHHPQQQQQH-QLDSINHNNADDSP 199
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,855,966
Number of Sequences: 1657284
Number of extensions: 9862064
Number of successful extensions: 33218
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 30513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32734
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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