Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303D09f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    29   0.033
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   8.7  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   8.7  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   8.7  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 28.7 bits (61), Expect = 0.033
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 388 LANILSLVALKLQHLAVLRVLHDRTVARELLLACPH 281
           L +I   VAL ++HLA  RV+H    AR +L+   H
Sbjct: 594 LLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENH 629


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 513 NYNAQSLIIQC*VWTCYVLA 454
           NY +   I    VW C VLA
Sbjct: 2   NYRSSKSISTQAVWVCMVLA 21


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 513 NYNAQSLIIQC*VWTCYVLA 454
           NY +   I    VW C VLA
Sbjct: 2   NYRSSKSISTQAVWVCMVLA 21


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 513 NYNAQSLIIQC*VWTCYVLA 454
           NY +   I    VW C VLA
Sbjct: 2   NYRSSKSISTQAVWVCMVLA 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,235
Number of Sequences: 336
Number of extensions: 2439
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)