Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303D09f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiati...   197   2e-52
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   1.2  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   3.6  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   3.6  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   6.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   6.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   8.2  

>U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiation
           factor protein.
          Length = 110

 Score =  197 bits (481), Expect = 2e-52
 Identities = 90/101 (89%), Positives = 97/101 (96%)
 Frame = +2

Query: 113 MSIQNLNTFDPFADAIKSSEDDVQDGLVHVRIQQRNGRKTLTTVQGLSSEYDLKKIVRAC 292
           MSIQNLNTFDPFADAIK ++ DVQDGLVH+RIQQRNGRKTLTTVQGLS+EYDLKKIVRAC
Sbjct: 1   MSIQNLNTFDPFADAIKGADYDVQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRAC 60

Query: 293 KKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKFRLSE 415
           KKEFACNGTV+EHPEYGEVLQLQGDQRENICQWLTK  L++
Sbjct: 61  KKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKSGLAK 101



 Score = 31.9 bits (69), Expect = 0.013
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +3

Query: 402 SGLVKPEQLKVHGF 443
           SGL KPEQLKVHGF
Sbjct: 97  SGLAKPEQLKVHGF 110


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +2

Query: 266 DLKKIVRACKKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKFRLSEA 418
           DL ++V +  ++F C   V+  PE  E+L LQ  +   I  WLT+    EA
Sbjct: 532 DLMQMVSSQMQQFLCLQNVLLEPETDELL-LQFYEASAI--WLTQLSAREA 579


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
 Frame = -1

Query: 299 PSCMPAR--SSSGHI------PRKGLA--P*SASYARFVAGYG 201
           PS  P    SSSG        P  G A  P +ASY RF+AG G
Sbjct: 228 PSIFPTEVGSSSGRFRPILWTPENGYAEEPSNASYPRFIAGPG 270


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 10/43 (23%)
 Frame = -1

Query: 299 PSCMPAR--SSSGHI------PRKGLA--P*SASYARFVAGYG 201
           PS  P    SSSG        P  G A  P +ASY RF+AG G
Sbjct: 228 PSIFPTEVGSSSGRFRPILWTPENGYAEEPSNASYPRFIAGPG 270


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +3

Query: 282  CGHARRSSRATVRSWSTRSTARCCSFRATSE 374
            C  ARR +    R W T    R  S R  +E
Sbjct: 1064 CEAARRITTTLQRDWDTEREQRAASNREEAE 1094


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -3

Query: 222 PFRCWIRTWTK 190
           P  CWI  WT+
Sbjct: 565 PIHCWIHPWTE 575


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 106 QSYVHPESQHIRPIR 150
           QS  HP SQH +P R
Sbjct: 266 QSQQHPSSQHQQPSR 280


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,155
Number of Sequences: 2352
Number of extensions: 10684
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)