Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303D05f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 prot... 34 0.067
At3g27710.1 68416.m03460 zinc finger protein-related contains si... 33 0.088
At3g27720.1 68416.m03461 zinc finger protein-related contains Pf... 33 0.15
At3g30550.1 68416.m03866 hypothetical protein includes At2g05890... 32 0.20
At4g34370.1 68417.m04883 IBR domain-containing protein similar t... 30 0.82
At4g39510.1 68417.m05587 cytochrome P450 family protein contains... 30 1.1
At2g17260.1 68415.m01993 glutamate receptor family protein (GLR3... 30 1.1
At5g63450.1 68418.m07965 cytochrome P450, putative 28 3.3
At4g40020.1 68417.m05666 hypothetical protein 28 3.3
At4g35290.2 68417.m05015 glutamate receptor family protein (GLR3... 28 4.4
At4g35290.1 68417.m05014 glutamate receptor family protein (GLR3... 28 4.4
At4g13040.1 68417.m02035 AP2 domain-containing transcription fac... 28 4.4
At5g57180.2 68418.m07143 expressed protein ; supporting cDNA gi|... 27 5.8
At5g57180.1 68418.m07142 expressed protein ; supporting cDNA gi|... 27 5.8
At5g47730.1 68418.m05897 SEC14 cytosolic factor, putative / poly... 27 5.8
At4g00620.1 68417.m00086 tetrahydrofolate dehydrogenase/cyclohyd... 27 5.8
At3g13540.1 68416.m01702 myb family transcription factor contain... 27 5.8
At2g32390.1 68415.m03958 glutamate receptor family protein (GLR3... 27 5.8
At4g31110.1 68417.m04415 wall-associated kinase, putative simila... 27 7.7
At4g31100.1 68417.m04414 wall-associated kinase, putative 27 7.7
At3g18590.1 68416.m02363 plastocyanin-like domain-containing pro... 27 7.7
At1g53310.1 68414.m06042 phosphoenolpyruvate carboxylase, putati... 27 7.7
At1g10610.1 68414.m01202 basic helix-loop-helix (bHLH) family pr... 27 7.7
At1g03380.1 68414.m00317 expressed protein 27 7.7
>At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 protein,
Xenopus laevis, PIR:T30335
Length = 1229
Score = 33.9 bits (74), Expect = 0.067
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Frame = +2
Query: 8 KMKT-VQVILCLFVASLYANETSVSDSKLEDDLYNSI--LVADYDHSVEKSKQIYEDKKS 178
++KT VQ I C+ A+ET++ SK DDL I L+ D + +E +Q+ E+ S
Sbjct: 714 EVKTMVQAIACVSQREAEAHETAIKLSKENDDLRQKIKVLIEDNNKLIELYEQVAEENSS 773
Query: 179 EVITNVVNKLIRNN--KMNCMEYAYQLWLQGSKDIVRECFPVEFRLI-FAENNIKLM 340
+ NN N E A ++ +++ + +E +L + N KLM
Sbjct: 774 RAWGKIETDSSSNNADAQNSAEIALEVEKSAAEEQKKMIGNLENQLTEMHDENEKLM 830
>At3g27710.1 68416.m03460 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 537
Score = 33.5 bits (73), Expect = 0.088
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = +2
Query: 56 YANETSVSDSKLEDDLYNSILVADYDHSVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCM 235
Y + + KLED L SIL +S K ++++ K+ +T+ VN+L + ++
Sbjct: 353 YRYKAHIDSLKLEDKLRKSILEKAVSNSETKDQKVF--KEYSWVTDAVNRLFISRRILSQ 410
Query: 236 EYAYQLWLQGSK 271
Y + ++ G +
Sbjct: 411 SYPFAFYMFGEE 422
>At3g27720.1 68416.m03461 zinc finger protein-related contains
Pfam:PF01485 IBR domain
Length = 493
Score = 32.7 bits (71), Expect = 0.15
Identities = 23/86 (26%), Positives = 43/86 (50%)
Frame = +2
Query: 56 YANETSVSDSKLEDDLYNSILVADYDHSVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCM 235
Y + + KLED L SIL +S K ++++ K+ I + VN+L R+ ++
Sbjct: 313 YRYKAHIDSLKLEDKLKKSILKKAVLNSETKDQKVF--KEYSWIIDAVNRLFRSRRILSY 370
Query: 236 EYAYQLWLQGSKDIVRECFPVEFRLI 313
Y + ++ G K++ ++ E R I
Sbjct: 371 SYPFVFYMFG-KELFKDDMSDEERNI 395
>At3g30550.1 68416.m03866 hypothetical protein includes At2g05890,
At4g07450, At3g30630, At3g43100, At2g09960, At3g30550,
At1g39430, At2g10460, At4g03640, At5g35250
Length = 509
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 KMKTVQVILCLFVASLYANETSVSDSKL-EDDLYNSILVADYDHSVEKSKQIYEDKKSEV 184
K KT Q +LC+ +++ S + +++ D++ + I+ DYD V+ S I ++ S +
Sbjct: 398 KGKTFQFLLCVQRENIFGGYDSFTVARVYTDNIADEIVQEDYDAYVDPSSLISIEQDSLM 457
Query: 185 ITNVVN 202
+TN V+
Sbjct: 458 LTNGVD 463
>At4g34370.1 68417.m04883 IBR domain-containing protein similar to
SP|Q94981 Ariadne-1 protein (Ari-1) {Drosophila
melanogaster}; contains Pfam profile PF01485: IBR domain
Length = 597
Score = 30.3 bits (65), Expect = 0.82
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Frame = +2
Query: 83 SKLEDDLYNSILVADYDHSVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCMEYAYQLWLQ 262
SKLED L ++I ++ + K+ + K +TN +++L R+ ++ YA+ ++
Sbjct: 364 SKLEDKLRDTI----HEKVSKSEKRELKLKDFSWVTNGLDRLFRSRRVLSYSYAFAYYMF 419
Query: 263 GSKDIVRECFPVEFRL---IFAENNIKLMYKRDGLALTLD---DENSNDGRLA 403
G + E P E + +F + +L + L+ L+ DE SND +A
Sbjct: 420 GEEMFKDEMTPEEREIKKNLFEDQQQQLESNVEKLSQFLEEPFDEFSNDKVMA 472
>At4g39510.1 68417.m05587 cytochrome P450 family protein contains
Pfam PF00067: Cytochrome P450; similar to Cytochrome
P450 86A2 (SP:O23066) [Arabidopsis thaliana]
Length = 508
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 323 NNIKLMYKRDGLALTLDDENSNDGRLAYG-DGKDKTSPKVSWKFVPLWENNKVYFKI 490
++IKL + L DD+ D LA+ G+D TS +SW F L EN +V KI
Sbjct: 281 SHIKLDTTKYELLNPSDDKFLRDTILAFNLAGRDTTSSALSWFFWLLSENPQVVTKI 337
>At2g17260.1 68415.m01993 glutamate receptor family protein (GLR3.1)
(GLR2) identical to putative glutamate receptor GLR2
[Arabidopsis thaliana] gi|4185740|gb|AAD09174; plant
glutamate receptor family, PMID:11379626
Length = 951
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 350 DGLALTLDDENSNDGRLAYGDGKDKTSPKVSWKFV 454
D +AL DD+NS +G A GD ++ K+S+K V
Sbjct: 194 DVVALYNDDDNSRNGVTALGDELEERRCKISYKAV 228
>At5g63450.1 68418.m07965 cytochrome P450, putative
Length = 510
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 413 GKDKTSPKVSWKFVPLWENNKVYFKIVNTQRNQ 511
G+D TS ++W F L +N+ V KI++ RN+
Sbjct: 306 GRDTTSAAMTWLFWLLSQNDDVETKILDELRNK 338
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/96 (21%), Positives = 49/96 (51%)
Frame = +2
Query: 104 YNSILVADYDHSVEKSKQIYEDKKSEVITNVVNKLIRNNKMNCMEYAYQLWLQGSKDIVR 283
Y+S VAD + K K E++++EV++ L ++ + +E A + L KD R
Sbjct: 17 YSSNKVADIGTELYKMKASLENRENEVVSLKQELLKKDIFIKNLEAAEKKLLDSFKDQSR 76
Query: 284 ECFPVEFRLIFAENNIKLMYKRDGLALTLDDENSND 391
E E + + E+ +++ ++ + + + ++S++
Sbjct: 77 EL--EETKALVEESKVEIASLKEKIDTSYNSQDSSE 110
>At4g35290.2 68417.m05015 glutamate receptor family protein (GLR3.2)
(GLUR2) identical to putative glutamate receptor
like-protein GLUR2 [Arabidopsis thaliana]
gi|13160471|gb|AAK13248; plant glutamate receptor
family, PMID:11379626
Length = 912
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 356 LALTLDDENSNDGRLAYGDGKDKTSPKVSWKFV 454
+AL DD+NS +G A GD + K+S+K V
Sbjct: 166 IALYNDDDNSRNGITALGDELEGRRCKISYKAV 198
>At4g35290.1 68417.m05014 glutamate receptor family protein (GLR3.2)
(GLUR2) identical to putative glutamate receptor
like-protein GLUR2 [Arabidopsis thaliana]
gi|13160471|gb|AAK13248; plant glutamate receptor
family, PMID:11379626
Length = 912
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 356 LALTLDDENSNDGRLAYGDGKDKTSPKVSWKFV 454
+AL DD+NS +G A GD + K+S+K V
Sbjct: 166 IALYNDDDNSRNGITALGDELEGRRCKISYKAV 198
>At4g13040.1 68417.m02035 AP2 domain-containing transcription factor
family protein contains Pfam profile PF00847: AP2 domain
Length = 226
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +3
Query: 78 PTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAKSSQMS*TNSY 212
P PN++ + + +TT+ +++ R+RR +S M + Y
Sbjct: 36 PNPNARAAYNPGPAETVTTVIVEKKAIEERSRRTRSKHMHFRSDY 80
>At5g57180.2 68418.m07143 expressed protein ; supporting cDNA
gi|13991645|gb|AF359387.1|AF359387
Length = 435
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Frame = +3
Query: 66 KPQSPTPNSKTIFTTASSLPITTI------PLKRANRSTRTRRAKSSQ 191
K +SP P+S T T A+S P +TI PL + R RT+R + +Q
Sbjct: 21 KVKSPPPSSSTTTTRATS-PSSTISESSNSPLAISTRKPRTQRKRPNQ 67
>At5g57180.1 68418.m07142 expressed protein ; supporting cDNA
gi|13991645|gb|AF359387.1|AF359387
Length = 424
Score = 27.5 bits (58), Expect = 5.8
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Frame = +3
Query: 66 KPQSPTPNSKTIFTTASSLPITTI------PLKRANRSTRTRRAKSSQ 191
K +SP P+S T T A+S P +TI PL + R RT+R + +Q
Sbjct: 21 KVKSPPPSSSTTTTRATS-PSSTISESSNSPLAISTRKPRTQRKRPNQ 67
>At5g47730.1 68418.m05897 SEC14 cytosolic factor, putative /
polyphosphoinositide-binding protein, putative similar
to polyphosphoinositide binding protein SEC14 homolog
Ssh1p (GI:2739044) {Glycine max}
Length = 341
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 320 ENNIKLMYKRDGLALTLDDENSNDGRLAYGD 412
E+ + R+GLA+++DD S+ LA GD
Sbjct: 310 ESELHKFENRNGLAVSIDDRKSSHETLANGD 340
>At4g00620.1 68417.m00086 tetrahydrofolate
dehydrogenase/cyclohydrolase, putative similar to
SP|P07245 C-1-tetrahydrofolate synthase, cytoplasmic
(C1-THF synthase) [Includes: Methylenetetrahydrofolate
dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate
cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate
synthetase (EC 6.3.4.3)] {Saccharomyces cerevisiae};
contains Pfam profiles PF02882: Tetrahydrofolate
dehydrogenase/cyclohydrolase, NAD(P)-binding domain,
PF00763: Tetrahydrofolate dehydrogenase/cyclohydrolase,
catalytic domain
Length = 360
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Frame = -2
Query: 415 AIAVGKSAIV---AVLIVQRQSETVALVH 338
A+ +G+S IV A L++QR+ TV+++H
Sbjct: 230 AVVIGRSNIVGMPAALLLQREDATVSIIH 258
>At3g13540.1 68416.m01702 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 249
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +2
Query: 44 VASLYANETSVSDSKLEDDLYNSILVADYDHSVEKSKQIYEDKKSEVITNVVN 202
++S + ++T+V+ + D NSI V +H E Y+DK S + +++N
Sbjct: 163 ISSSHTDDTTVNGG--DGDSKNSINVFGGEHGYEDFGFCYDDKFSSFLNSLIN 213
>At2g32390.1 68415.m03958 glutamate receptor family protein (GLR3.5)
plant glutamate receptor family, PMID:11379626
Length = 895
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 347 RDGLALTLDDENSNDGRLAYGDGKDKTSPKVSWK--FVPLWENNKV 478
R+ +A+ +DDE +G GD K K+S+K F P +N+ +
Sbjct: 123 REVVAIFVDDEYGRNGISVLGDALAKKRAKISYKAAFPPGADNSSI 168
>At4g31110.1 68417.m04415 wall-associated kinase, putative similar
to wall-associated kinase 1, Arabidopsis thaliana,
gb:AJ009696
Length = 756
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 101 LYNSILVADYDHSVEKSKQIYEDKKSEVITNVV 199
+Y +LV +V+KSK I EDK E I VV
Sbjct: 430 VYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVV 462
>At4g31100.1 68417.m04414 wall-associated kinase, putative
Length = 786
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 101 LYNSILVADYDHSVEKSKQIYEDKKSEVITNVV 199
+Y +LV +V+KSK I EDK E I VV
Sbjct: 458 VYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVV 490
>At3g18590.1 68416.m02363 plastocyanin-like domain-containing
protein
Length = 188
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 72 QSPTPNSKTIFTTASSLPITTIPLKRAN 155
+SP P+S + +++SSLP +T K++N
Sbjct: 134 ESPPPSSSSSSSSSSSLPASTPKAKKSN 161
>At1g53310.1 68414.m06042 phosphoenolpyruvate carboxylase, putative
/ PEP carboxylase, putative (PPC1) strong similarity to
SP|P29196 Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
(PEPCASE) {Solanum tuberosum}; contains Pfam profile
PF00311: phosphoenolpyruvate carboxylase
Length = 967
Score = 27.1 bits (57), Expect = 7.7
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -2
Query: 451 ELPADFWTRLVLAIAVGKSAIVAVLIVQRQ 362
ELPAD + ++++A S ++AV ++QR+
Sbjct: 519 ELPADSFGAYIISMATAPSDVLAVELLQRE 548
>At1g10610.1 68414.m01202 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 421
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 56 YANETSVSDSKLEDDLYNSILVADYDHSVEKSKQIYEDKKSEVITNVVNKLIRNNKM 226
Y NE V KLED+L I + + + D ++E +++ NK ++ N++
Sbjct: 305 YINELLVEKQKLEDEL-KGINEMECKEIAAEEQSAIADPEAERVSSKSNKRVKKNEV 360
>At1g03380.1 68414.m00317 expressed protein
Length = 926
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +2
Query: 434 KVSWKFVPLWENNKVYFKIVNTQRNQYLT 520
KV+ +P+W+N+K+ F ++++ R+ T
Sbjct: 671 KVTSGMLPVWQNSKISFHVMDSPRDSSST 699
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,903,218
Number of Sequences: 28952
Number of extensions: 158597
Number of successful extensions: 737
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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