Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303D02f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23) 32 0.25
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_50003| Best HMM Match : PAN (HMM E-Value=0.044) 31 0.58
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 31 0.76
SB_10378| Best HMM Match : TSGP1 (HMM E-Value=2) 30 1.0
SB_21034| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 30 1.3
SB_28308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38) 29 1.8
SB_44588| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_20227| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_17373| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_11561| Best HMM Match : HAT (HMM E-Value=1.1) 29 3.1
SB_9272| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_48636| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_38092| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_20452| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_25705| Best HMM Match : PH (HMM E-Value=2e-17) 28 4.1
SB_14622| Best HMM Match : DUF1441 (HMM E-Value=1.6) 28 4.1
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_9915| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_48509| Best HMM Match : DUF352 (HMM E-Value=2.4) 28 5.4
SB_34828| Best HMM Match : W2 (HMM E-Value=6.9) 28 5.4
SB_24870| Best HMM Match : zf-GRF (HMM E-Value=0.019) 28 5.4
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33) 27 7.1
SB_41057| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_27838| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05) 27 7.1
SB_59772| Best HMM Match : dDENN (HMM E-Value=1.6e-24) 27 7.1
SB_57248| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_55276| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_24078| Best HMM Match : cNMP_binding (HMM E-Value=1.4e-26) 27 7.1
SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32) 27 9.4
SB_45626| Best HMM Match : Equine_IAV_S2 (HMM E-Value=6.6) 27 9.4
SB_41056| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_33019| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_21253| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0) 27 9.4
SB_15672| Best HMM Match : DUF1556 (HMM E-Value=8.9) 27 9.4
SB_11732| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_10582| Best HMM Match : DUF1168 (HMM E-Value=1.8) 27 9.4
SB_49819| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_24123| Best HMM Match : RCSD (HMM E-Value=3.8) 27 9.4
SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11) 27 9.4
SB_5701| Best HMM Match : Linker_histone (HMM E-Value=5.9e-39) 27 9.4
SB_5549| Best HMM Match : PT (HMM E-Value=1.9) 27 9.4
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 35.5 bits (78), Expect = 0.027
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 259 PPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSG 423
PPR+ PK TP+KP + ++ S ++KA E +D G+++ K G
Sbjct: 1167 PPRKKPKNKGNKSPSTPSKPAMSARRDSEENIEKALEAG--LDQFGVEVLQEKEG 1219
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +1
Query: 250 NTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATER----NDKVDSVGIQMQDNK 417
++SPP+ T ++ P KPPS K K PI K R N+ D G+ +
Sbjct: 1510 SSSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSKPARRGSGSNNNSDDAGVGIYSEA 1569
Query: 418 SGHR 429
S R
Sbjct: 1570 SPTR 1573
>SB_52978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +1
Query: 235 VDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDN 414
+D+ ++ S + PKKTP L + +KP ++ K + + TE N K+ N
Sbjct: 590 IDEGLDFSSKQTKPKKTPIFLQGSIDKPKPPEEPKKKNENELLTENNRKMSGASSTRSKN 649
Query: 415 KSGHRIGMRLRNL 453
+ ++NL
Sbjct: 650 SVSYDFKESVQNL 662
>SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23)
Length = 565
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 256 SPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERND 378
SP QS TPK+ ++ ++PPS ++SP + TE+ +
Sbjct: 525 SPKSQSRPSTPKVGSRPSSRPPSGSPRQSPQPSIETTEQTE 565
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 32.3 bits (70), Expect = 0.25
Identities = 27/79 (34%), Positives = 38/79 (48%)
Frame = +1
Query: 142 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 321
LPP P P PV IR + +F DDF + + + K K+ +K +K
Sbjct: 899 LPPAPPP--PVDHAL---FDTSIRPPS--LFSDDFEDVTRVKPKTKSELKVKSKPAHK-- 949
Query: 322 SAKKQKSPIKVQKATERND 378
S KKQ SPIK+ A + N+
Sbjct: 950 SHKKQTSPIKMFSADDANN 968
>SB_50003| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 286
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +1
Query: 139 KLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKP 318
+LPP P P+ +K P ++ + + V ++PP+Q P+ T +T
Sbjct: 55 QLPPAPQPTANPEKAEE---PQPLKPLDNYTSAAAAVPSTPPKQDPRST-VAFGRTTKSS 110
Query: 319 PSAKKQKSPIKVQKATERNDKV 384
P K V++ + ND+V
Sbjct: 111 PVQKSPSRVGHVRRYSLENDQV 132
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 30.7 bits (66), Expect = 0.76
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 157 APSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPS-AKK 333
AP +K + + + + K++ + D + S P PK + N P K AKK
Sbjct: 258 APHHEEKKEDLKEVVIKQSKQDEATAIKDSKSESKPASKPK-LKAVQNDAPKKANKPAKK 316
Query: 334 QKSPIKVQKATERNDKVDSV 393
K P+K K K+D++
Sbjct: 317 AKKPVKRAKKVLNKKKMDTL 336
>SB_10378| Best HMM Match : TSGP1 (HMM E-Value=2)
Length = 114
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 259 PPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATE-RNDKVDSVGIQMQDNKSGHR 429
P Q K P K P KP KK K P K +K + R K G ++ + GH+
Sbjct: 51 PATQYGKWRPYESKKKPKKPRKPKKPKKPRKPKKPKKPRKPKKPKKGKWRKNKQGGHK 108
>SB_21034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1101
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 259 PPRQSPKKTPKILNKTPNKPPSAKKQK-SPIKVQKATERNDKVDSVGIQMQDNKSGHRIG 435
P + SP P +TP PP + K + +K+ E+ND + S + + GH
Sbjct: 903 PQQPSPSPEPAAPTETPESPPDGEGDKGGEGESEKSKEKNDDLTS-----KMHVLGHDEN 957
Query: 436 MRLRNLLKLP 465
+R ++L LP
Sbjct: 958 IRTKSLEHLP 967
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 262 PRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATER 372
P+ SPK +PK KT +K QK+ + + T R
Sbjct: 138 PKTSPKSSPKTSPKTSSKTSLKTSQKTSLNASRKTSR 174
>SB_28308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 298 NKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQ-DNKSGHRIGMRLRNLLK 459
+ T PP+AK+QK A E D ++++G Q ++ I RL +++K
Sbjct: 159 DNTSTGPPAAKRQKGDDSQNSACEEQDILNNLGKQYSTTDQESPEINARLADIVK 213
>SB_12695| Best HMM Match : Linker_histone (HMM E-Value=1.6e-38)
Length = 184
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +1
Query: 247 VNTSPPRQSPK---KTPKILNKTPNKPPSAKKQKSPIK--VQKATERNDK 381
V P+++ K K PK K K P+AKK KSP K +KAT+ K
Sbjct: 91 VKAEKPKKAKKPAAKKPKAAKKPAAKKPAAKKAKSPKKSAPKKATKSPKK 140
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 256 SPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATER 372
SP + +PKK K KT KP A K+ + K +KA +
Sbjct: 125 SPKKSAPKKATKSPKKTAKKP--AAKKPAAAKPKKAAAK 161
>SB_44588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +1
Query: 247 VNTSPPRQSPK---KTPKILNKTPNKPPSAKKQKSPIK--VQKATERNDK 381
V P+++ K K PK K K P+AKK KSP K +KAT+ K
Sbjct: 91 VKAEKPKKAKKPAAKKPKAAKKPAAKKPAAKKAKSPKKPAPKKATKSPKK 140
>SB_20227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 361
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/95 (21%), Positives = 42/95 (44%)
Frame = +1
Query: 184 NARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKA 363
N R P IR +N + TS P+ K +P + P +PP+ KK++ P++V +
Sbjct: 98 NNRVSPETIRDENHNNRALPKLITSDPKVKLKPSPPPV--AP-RPPNTKKKEQPVRVSTS 154
Query: 364 TERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPK 468
+++ + I ++ + ++ P+
Sbjct: 155 ESPSEEDSGISIDVRARMELDSVNSESNEVIATPR 189
>SB_17373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +1
Query: 247 VNTSPPRQSPK---KTPKILNKTPNKPPSAKKQKSPIK--VQKATERNDK 381
V P+++ K K PK K K P+AKK KSP K +KAT+ K
Sbjct: 154 VKAEKPKKAKKPAAKKPKAAKKPAAKKPAAKKAKSPKKPAPKKATKSPKK 203
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Frame = +1
Query: 142 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNK-- 315
+ P P+ PV++ P NR +T+P P++ K N +P++
Sbjct: 318 ISPVTTPTAPVEREEGSRSPDHALCSNRSPVSSPLAHTTPTSTVPREHLK--NASPSQIV 375
Query: 316 ----PPSAKKQKSPIKVQKATERNDKVDSVG 396
P AK+ SP+ +R+ V SVG
Sbjct: 376 ESGSSPHAKEPVSPVHDVPTEDRHSPVKSVG 406
>SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 136 TKLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNK 315
T LP P ++ + G ++ ++ + + + PR S ++TP+ +TP
Sbjct: 409 TPLPTTPRSGSQAERTTSSGSSDKLSRRRGLLTL----TLAVPRSSSQRTPRSAQRTPRS 464
Query: 316 PPSAKK-QKSPIKVQK 360
SA++ +S VQ+
Sbjct: 465 GSSAQRTPRSGSSVQR 480
>SB_11561| Best HMM Match : HAT (HMM E-Value=1.1)
Length = 409
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 238 DDFVNTSPPRQSPKKTPKILNK-TPNKPPSAKKQKSPIKVQKATER 372
D V P + +PK TPK+ K TP P + +P K T +
Sbjct: 36 DQSVGPEPSKVTPKVTPKVTPKVTPKVTPKVTPKVTPKVTPKVTPK 81
>SB_9272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +1
Query: 265 RQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHR 429
+QSP+ +PK K+ KP + K +SP + + +D+ D + +D + R
Sbjct: 41 QQSPRASPKATRKSTPKPRTPSKGRSPSR-KLIGFSSDEEDGDSVSTRDRRGSIR 94
>SB_48636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +1
Query: 247 VNTSPPRQSPK---KTPKILNKTPNKPPSAKKQKSPIK 351
V P+++ K K PK K K P+AKK KSP K
Sbjct: 90 VKAEKPKKAKKPAAKKPKAAKKPAAKKPAAKKAKSPKK 127
>SB_38092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/74 (22%), Positives = 33/74 (44%)
Frame = +1
Query: 211 RKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDS 390
R+KN+ +D + P + + + +L KTP+ + KSP + K R
Sbjct: 1 RRKNKMSGLDRSIPEVPAKPDQRPSSAVLTKTPSDHEHKETPKSPGPLSKRWFR----QQ 56
Query: 391 VGIQMQDNKSGHRI 432
GI+ +D + ++
Sbjct: 57 FGIRNEDTRKASKV 70
>SB_20452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +1
Query: 247 VNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQ 408
VN++ PR++ +KT + K K +KK+ I + E + + S ++ +
Sbjct: 761 VNSASPRKNTRKTKSLRKKASLKELKSKKENCDIVSKLTPEMRNDLSSASVESE 814
>SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 214 KKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSP 345
K N D+ PPRQS PKI + P+A + ++P
Sbjct: 220 KVNFSCVFDNVTGVEPPRQSSTPQPKITGTSQPSNPTATQPQNP 263
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/110 (16%), Positives = 47/110 (42%)
Frame = +1
Query: 145 PPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPS 324
PP +P+Q+L + + +++ ++ + P K + + P + P+
Sbjct: 2604 PPSIGKQQPLQQLQEKQLQDQLQMQHMQKQTTQQLMQGPMMHLAGKQQQPPAQLPQQQPT 2663
Query: 325 AKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAH 474
K++ P+ + + + + +Q Q+NKS + ++ + K+H
Sbjct: 2664 QVKKQQPLPIAPSAGAHHQNKPPRLQAQENKSKQQSQVKQEGKKEENKSH 2713
>SB_25705| Best HMM Match : PH (HMM E-Value=2e-17)
Length = 409
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 14/77 (18%)
Frame = +1
Query: 145 PPKPAPSEPVQ-----KLNARGMPARIRKKNRFIFVDDFVNT---------SPPRQSPKK 282
PP+P SEP+Q + P + ++ D+F +T SPP KK
Sbjct: 256 PPRPPKSEPIQGETYDLVQEAAPPVALASQSEAALGDEFYDTAEEETESKPSPPPPGEKK 315
Query: 283 TPKILNKTPNKPPSAKK 333
P L P+ PP+ K
Sbjct: 316 AP--LPTPPSTPPAVTK 330
>SB_14622| Best HMM Match : DUF1441 (HMM E-Value=1.6)
Length = 426
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -3
Query: 441 SHANSMT*FIVLHLDAYRIYLIIPLCSLLNFYWRFLFFCTWWFIR 307
S S+ F+ +DAYR+Y ++P +F+ + T W++R
Sbjct: 75 SFTQSLVQFVHQEMDAYRLYTVVPRLV------KFIEYLTNWYVR 113
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = +1
Query: 256 SPPRQ---SPKKTPKILNKTPNKPPSAKKQKSPIKVQKATER 372
SPPR+ SP +P + +P PP K+ +P ++A +
Sbjct: 929 SPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSPRRARRK 970
>SB_9915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 190 RGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQ 357
R P+R K+NR + D V +P P +T P S+K +K+P+ Q
Sbjct: 18 RSSPSRRHKRNRSLKNRDEVFATP----PSSVTLAFTRTRGTPSSSKLRKTPVLTQ 69
>SB_48509| Best HMM Match : DUF352 (HMM E-Value=2.4)
Length = 268
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +1
Query: 178 KLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQ 357
KL + P + ++N+ FV V TS R+ K +PK + + PP Q+ PI+ +
Sbjct: 143 KLAVQNRPQQSEEENK-TFVTQQV-TSKKRKGRKASPKNPETSTSLPPLTMSQEEPIERR 200
Query: 358 KATERNDKVDSVGIQMQDNKSGHRIGM 438
+ K S ++ ++ ++G+
Sbjct: 201 LKRKHLSKQLSFPEMLKVSREMSKVGL 227
>SB_34828| Best HMM Match : W2 (HMM E-Value=6.9)
Length = 184
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 253 TSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQK 360
T PP P+ TPK P PP + P + K
Sbjct: 137 TPPPPTPPQSTPKPRRVLPTPPPKPPTPRPPRRASK 172
>SB_24870| Best HMM Match : zf-GRF (HMM E-Value=0.019)
Length = 197
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 244 FVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKAT 366
FV P+ S +K P + PPS KK+K+P + +K T
Sbjct: 98 FVWAEEPKDSERKKPAAVWT----PPSMKKKKAPARARKQT 134
>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
Length = 665
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Frame = +1
Query: 148 PKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKT-----PKILNKTPN 312
P P PSE Q + P + + + + +PP ++ K T P I K P
Sbjct: 307 PPPQPSEEKQDIPLPSKPTAGARDMKKVLPKELKKPAPPPENSKPTIDAPKPSIPPKKPV 366
Query: 313 KPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKS 420
P + K + K + + +S I M + K+
Sbjct: 367 PPKPSTKPQIHKKAVPIPPVDHRKESPKISMTEEKA 402
>SB_41057| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/61 (34%), Positives = 25/61 (40%)
Frame = +1
Query: 178 KLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQ 357
KLN + A KK + T P + K TP K+P KP K KSP K
Sbjct: 207 KLNKAAVKAEKPKKAKKPAAKKPKATKKP--AAKTTPSNKAKSPKKPAPKKATKSPKKAA 264
Query: 358 K 360
K
Sbjct: 265 K 265
>SB_27838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 196 MPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQK 360
MP + + ++ + +T +K K + K NK P KKQK P KVQK
Sbjct: 1 MPDKRPQLTAYLAEYERTHTQMDAYKKRKHAKRIKKHRNKIP--KKQKKPTKVQK 53
>SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05)
Length = 493
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +1
Query: 256 SPPRQSPKKTPKILNK--TPNKPPSAKKQ-KSP-IKVQKATERNDKVDSVGIQMQDN 414
+PP++SPKK+PK + + + P AK++ +SP + K + R V S +++N
Sbjct: 45 APPKKSPKKSPKSPKRRSSDSGPLKAKQEGQSPKDPIPKGSPRTPPVTSKRRSLKEN 101
>SB_59772| Best HMM Match : dDENN (HMM E-Value=1.6e-24)
Length = 423
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +1
Query: 304 TPNKPPSAKKQKSPIKVQKATERNDKVDSV 393
+P P AKKQKSP K TER +K V
Sbjct: 161 SPKLKPRAKKQKSPSSSPK-TERREKPSRV 189
>SB_57248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 256 SPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKA-TERNDKVDSVG 396
+PP KT I+ NKP K++KS IK K T+ +D+ + G
Sbjct: 188 TPPNFHEDKTGGIVTTKKNKPKYRKEEKSNIKGFKTDTQISDRKVNTG 235
>SB_55276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Frame = +1
Query: 139 KLPPKPAPSEPVQKLNARGMPARIRK-----KNRFIFVDDFVNTSPPRQSPKKTPKILNK 303
+LPP P E A G ++ RK K+RF +DD+ ++ P Q ++ ++
Sbjct: 221 RLPPLQIPREHEDSSKA-GFDSKTRKERGPRKSRFEPLDDYGDSRDPNQGSRERSELREG 279
Query: 304 TPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKS 420
+ PS + ++ ++R DK + + +N++
Sbjct: 280 QSSYRPSHRLEEREEYPALYSDRYDKTNHYEDRKTNNET 318
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +1
Query: 145 PPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPS 324
PP P P EP +++ P + K + I + F++ P P P P
Sbjct: 945 PPSPPPKEPTPPPSSKPSPVKEIKPKKPI--EKFISRPKPPTPPPVVSPHKQTRPISPVG 1002
Query: 325 AKKQKSPI-KVQKATERNDKVDSV 393
A P+ +T + K DS+
Sbjct: 1003 ASNLYKPLTPTSPSTLQPSKQDSL 1026
>SB_24078| Best HMM Match : cNMP_binding (HMM E-Value=1.4e-26)
Length = 692
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 158 LQVSQFKNLMQGECPLGSERKIGSFLLTIL*TRHLHDSLQKRLQKYL 298
L V F++ L + K G LL ++ +LH S++KRLQ +L
Sbjct: 158 LTVGIFRSPSPERGRLSEKSKRGIRLLCVVRNTNLHPSIRKRLQNWL 204
>SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.5 bits (58), Expect = 7.1
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Frame = +1
Query: 133 GTKLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPN 312
G + P P P +P + G P N I D NT P P TP N PN
Sbjct: 41 GDRPPNTPIPGDPPPNIPIPGNPP----PNTPIPGDPPPNTPIPGDPPPNTPIPGNPPPN 96
Query: 313 KP-PSAKKQKSPI 348
P P +PI
Sbjct: 97 TPIPGDPPPNTPI 109
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 259 PPRQSPKKTPKILNKTPNKPPSAKKQKSP 345
PP +P P N TP PP K P
Sbjct: 349 PPTNNPPSPPPPTNNTPPPPPPTNKPPPP 377
>SB_55246| Best HMM Match : DUF1168 (HMM E-Value=0.32)
Length = 943
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +1
Query: 214 KKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 321
K +R++ + + PR SP + ++ + PN+PP
Sbjct: 885 KCSRYVLITEKPGKKGPRASPLEQSLLMARFPNQPP 920
>SB_45626| Best HMM Match : Equine_IAV_S2 (HMM E-Value=6.6)
Length = 315
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 271 SPKKTPKILNKTPNKPPSAKKQKSPIKVQK 360
S + +P IL K PNK + K +K KVQ+
Sbjct: 21 SQRSSPVILTKHPNKHNTGKGRKGEEKVQE 50
>SB_41056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 265 RQSPKKTPKILNKTPNKPPSAKKQKSPIKVQK 360
+ + K TP K+P KP K KSP K K
Sbjct: 148 KPAAKTTPSKKAKSPKKPAPKKATKSPKKAAK 179
>SB_33019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 877
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 241 DFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERND 378
+ + R S TP++ P P ++++KSP +V+K T ++
Sbjct: 462 ELMKAKESRASGNNTPEMKRGKPRTPEKSRRRKSP-EVRKRTNESE 506
>SB_21253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 139 KLPPKPAPSEPVQKLNARGMPARIRKK 219
++P P+EP+ L +PARIR++
Sbjct: 82 EIPATQGPNEPITDLGPSTLPARIRQE 108
>SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/67 (22%), Positives = 28/67 (41%)
Frame = +1
Query: 268 QSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLR 447
Q P LN+TP + + + + D + + M+ S +G+ +R
Sbjct: 282 QKPVVNEMPLNQTPRSSTATSRHSASPDMDDVAFSPDGATNNDVAMETEPSHLSMGVSIR 341
Query: 448 NLLKLPK 468
NL+KL +
Sbjct: 342 NLVKLSR 348
>SB_15672| Best HMM Match : DUF1556 (HMM E-Value=8.9)
Length = 192
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +1
Query: 214 KKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 321
K +R++ + + PR SP + ++ + PN+PP
Sbjct: 134 KCSRYVLITEKPGKKGPRASPLEQSLLMARFPNQPP 169
>SB_11732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 196 MPARIRKKNRFI---FVDDFVNTSPPRQSPKKTPKILNKTPNKPPS 324
+PA RK+ + FVD + P R S K+ P + T ++PPS
Sbjct: 859 IPAEERKEIKMELEKFVDSLADEPPMRVSLKEFPDTPDSTTHRPPS 904
>SB_10582| Best HMM Match : DUF1168 (HMM E-Value=1.8)
Length = 454
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 250 NTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKS 420
NTS P + P+ T + N + PP + K + + DKVD Q + S
Sbjct: 127 NTSLPNE-PQSTEVVKNTVGDPPPPVAPPRRKRKKKSPGQVEDKVDGPAASTQQDPS 182
>SB_49819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 663
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = -3
Query: 267 SWR*RVH--KIVN-KNEPIFLSDPSGHSPCIKFLNWLTWSW 154
+W+ H KI N K E S + HSP + L WL W +
Sbjct: 412 NWKNLCHRLKIPNSKYESFDASKKNAHSPTKQMLRWLKWKY 452
>SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 27.1 bits (57), Expect = 9.4
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +1
Query: 127 RVGTKLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKT 306
++ L PAP + + R + +R +R +NTS ++P KTPK NKT
Sbjct: 15 KLDAPLAKGPAPRWQRKASSGRSQTSPLRNSSR-------LNTST--KTPTKTPKSSNKT 65
Query: 307 PNKPPSAKKQKSP 345
P +AK K+P
Sbjct: 66 ---PLTAKTPKTP 75
>SB_24123| Best HMM Match : RCSD (HMM E-Value=3.8)
Length = 255
Score = 27.1 bits (57), Expect = 9.4
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +1
Query: 127 RVGTKLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKT 306
++ L PAP + + R + +R +R +NTS ++P KTPK NKT
Sbjct: 15 KLDAPLAKGPAPRWQRKASSGRSQTSPLRNSSR-------LNTST--KTPTKTPKSSNKT 65
Query: 307 PNKPPSAKKQKSP 345
P +AK K+P
Sbjct: 66 ---PLTAKTPKTP 75
>SB_6444| Best HMM Match : CRAM_rpt (HMM E-Value=3e-11)
Length = 2297
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 235 VDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQ 336
VDD VN + P+ PK P+ P +P A++Q
Sbjct: 1892 VDDKVNKTQPQAQPKPRPR--TNRPAQPVPARRQ 1923
>SB_5701| Best HMM Match : Linker_histone (HMM E-Value=5.9e-39)
Length = 370
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 265 RQSPKKTPKILNKTPNKPPSAKKQKSPIKVQK 360
+ + K TP K+P KP K KSP K K
Sbjct: 308 KPAAKTTPSKKAKSPKKPAPKKATKSPKKAAK 339
>SB_5549| Best HMM Match : PT (HMM E-Value=1.9)
Length = 282
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +1
Query: 247 VNTSPP---RQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATER 372
+ TSP ++SPK TPK KT K +K+ + + T R
Sbjct: 25 LKTSPKTRRKKSPKTTPKTSLKTSRKTSLKTSRKTSLNASRKTSR 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,400,306
Number of Sequences: 59808
Number of extensions: 309631
Number of successful extensions: 1037
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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