Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303D02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical ... 40 0.001
Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical p... 37 0.010
Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical p... 37 0.010
AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. 37 0.010
AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein. 37 0.010
AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical ... 36 0.013
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 33 0.094
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 31 0.38
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 31 0.50
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 31 0.66
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 31 0.66
Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 30 1.2
Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 30 1.2
U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical ... 30 1.2
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 1.5
Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical pr... 29 1.5
U23528-6|AAK31385.1| 216|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 29 2.0
Z81454-2|CAB03804.2| 346|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical pr... 29 2.7
U80846-2|AAC70887.3| 516|Caenorhabditis elegans Hypothetical pr... 29 2.7
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.7
AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein. 29 2.7
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.7
Z81489-8|CAD60414.1| 120|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 28 3.5
U55376-3|AAA98005.3| 525|Caenorhabditis elegans Nuclear hormone... 28 3.5
Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical... 28 4.7
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 28 4.7
AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical ... 28 4.7
AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical ... 28 4.7
U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical pr... 27 6.2
U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 6.2
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 27 6.2
AC199169-1|ABO33259.1| 450|Caenorhabditis elegans Hypothetical ... 27 6.2
Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical p... 27 8.1
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 27 8.1
U80839-15|AAB37911.1| 430|Caenorhabditis elegans Hypothetical p... 27 8.1
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 27 8.1
U42841-7|AAM97957.1| 447|Caenorhabditis elegans Gex interacting... 27 8.1
AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical ... 27 8.1
>AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical
protein F42G8.7 protein.
Length = 572
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +1
Query: 208 IRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVD 387
I N F FV D N + R+ +K +++ K + +KQ S KV+K TE+ +K +
Sbjct: 346 IHNLNIFQFVADLFNDNHHRKLHEKLNELIQKIVTETEEIEKQASEEKVEKPTEKLEKHE 405
Query: 388 SVG--IQMQDNKSG 423
SVG I + SG
Sbjct: 406 SVGWLIAQSEQTSG 419
>Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical
protein ZK637.7b protein.
Length = 644
Score = 36.7 bits (81), Expect = 0.010
Identities = 35/125 (28%), Positives = 55/125 (44%)
Frame = +1
Query: 142 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 321
L P PAPS L A+ + +N +DD N P + + ++
Sbjct: 119 LSPPPAPSND---LLAKDLEMIEMHQNLVAGLDDLDN--PANMTNEAVEHRDTQSFFNMF 173
Query: 322 SAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAHKWVCFEYFY 501
S +++S + Q T +N + V M+ N +L NLL+ KA +WV E+FY
Sbjct: 174 STDQERSAMMKQFKTYKNQTSEDVSTFMRANIK------KLYNLLRYKKARQWVMCEFFY 227
Query: 502 SNIDK 516
S ID+
Sbjct: 228 SAIDE 232
>Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical
protein ZK637.7a protein.
Length = 642
Score = 36.7 bits (81), Expect = 0.010
Identities = 35/125 (28%), Positives = 55/125 (44%)
Frame = +1
Query: 142 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 321
L P PAPS L A+ + +N +DD N P + + ++
Sbjct: 117 LSPPPAPSND---LLAKDLEMIEMHQNLVAGLDDLDN--PANMTNEAVEHRDTQSFFNMF 171
Query: 322 SAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAHKWVCFEYFY 501
S +++S + Q T +N + V M+ N +L NLL+ KA +WV E+FY
Sbjct: 172 STDQERSAMMKQFKTYKNQTSEDVSTFMRANIK------KLYNLLRYKKARQWVMCEFFY 225
Query: 502 SNIDK 516
S ID+
Sbjct: 226 SAIDE 230
>AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein.
Length = 642
Score = 36.7 bits (81), Expect = 0.010
Identities = 35/125 (28%), Positives = 55/125 (44%)
Frame = +1
Query: 142 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 321
L P PAPS L A+ + +N +DD N P + + ++
Sbjct: 117 LSPPPAPSND---LLAKDLEMIEMHQNLVAGLDDLDN--PANMTNEAVEHRDTQSFFNMF 171
Query: 322 SAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAHKWVCFEYFY 501
S +++S + Q T +N + V M+ N +L NLL+ KA +WV E+FY
Sbjct: 172 STDQERSAMMKQFKTYKNQTSEDVSTFMRANIK------KLYNLLRYKKARQWVMCEFFY 225
Query: 502 SNIDK 516
S ID+
Sbjct: 226 SAIDE 230
>AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein.
Length = 644
Score = 36.7 bits (81), Expect = 0.010
Identities = 35/125 (28%), Positives = 55/125 (44%)
Frame = +1
Query: 142 LPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKPP 321
L P PAPS L A+ + +N +DD N P + + ++
Sbjct: 119 LSPPPAPSND---LLAKDLEMIEMHQNLVAGLDDLDN--PANMTNEAVEHRDTQSFFNMF 173
Query: 322 SAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKLPKAHKWVCFEYFY 501
S +++S + Q T +N + V M+ N +L NLL+ KA +WV E+FY
Sbjct: 174 STDQERSAMMKQFKTYKNQTSEDVSTFMRANIK------KLYNLLRYKKARQWVMCEFFY 227
Query: 502 SNIDK 516
S ID+
Sbjct: 228 SAIDE 232
>AF125972-1|AAD14770.2| 349|Caenorhabditis elegans Hypothetical
protein H25P19.1 protein.
Length = 349
Score = 36.3 bits (80), Expect = 0.013
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 133 GTKLPPKPAPSEPVQ-KLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTP 309
GT +P +P PS P + L R P+++ I + + +PP+ PK TP+ TP
Sbjct: 260 GTPMP-EPEPSRPPRINLKFRFTPSKLGTATPGISI--ISSPTPPKSPPKSTPRTSKSTP 316
Query: 310 NKPPSAKK 333
K P K+
Sbjct: 317 PKRPYLKR 324
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 33.5 bits (73), Expect = 0.094
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Frame = +1
Query: 148 PKPAPSEPVQKLNARGMPARIRK--KNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNKP- 318
PK +PV+ + + +K + F+ DD +T P KKTP+ +TP K
Sbjct: 154 PKTPAKKPVEISPSTKENTKTKKVSDDEFVDSDDSFDTFTPITVKKKTPEKRKETPKKKE 213
Query: 319 -PSAKKQ---KSPIKVQKATERNDK 381
PS KK+ K I V+K E K
Sbjct: 214 LPSVKKEFPKKQSIPVKKEKETPQK 238
Score = 33.1 bits (72), Expect = 0.12
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 241 DFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSV 393
DF SP S K PK+ KT KP + K+ P+++ +T+ N K V
Sbjct: 130 DFFKNSPA-PSASKLPKVAPKTVEKPKTPAKK--PVEISPSTKENTKTKKV 177
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 31.5 bits (68), Expect = 0.38
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = +1
Query: 127 RVGTKLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKT 306
+V K+P P S+ +QKL+A K F +D + SP T L T
Sbjct: 309 KVAPKVPEAPEISDALQKLSASMDGPEFSNKG---FTEDIFGSIEELMSPPTTTTTLQTT 365
Query: 307 PNKPPSAKKQKSP 345
+P + K +P
Sbjct: 366 TTRPQTTKTTTTP 378
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 31.1 bits (67), Expect = 0.50
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 136 TKLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPR-QSPKKTPKILNKTPN 312
TK+ P+P++ +K A PAR R N + S R ++ KTPK +KTP+
Sbjct: 26 TKMSKSPSPAKSARK--ASKSPARARTSNVKKTPSRSASKSATRGRTASKTPKTPSKTPS 83
Query: 313 KPPSAKKQKS 342
+ + +S
Sbjct: 84 SASARSRSRS 93
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 30.7 bits (66), Expect = 0.66
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 145 PPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKT 306
PP P PS P+ + + GM AR +N+ I ++ P Q P++ P N +
Sbjct: 572 PPPPPPSHPLPQNGSHGM-ARNTSQNQ-ISYHEYTPQPPTTQPPQRPPGSANSS 623
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 30.7 bits (66), Expect = 0.66
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 145 PPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKT 306
PP P PS P+ + + GM AR +N+ I ++ P Q P++ P N +
Sbjct: 600 PPPPPPSHPLPQNGSHGM-ARNTSQNQ-ISYHEYTPQPPTTQPPQRPPGSANSS 651
>Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 145 PPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKT-PNKPP 321
PP P+EP Q N +P+R + + F D N PP+ +P L K PN P
Sbjct: 276 PPNRHPNEPPQGGNIYEVPSR----DHYDFPPDAFNEEPPKTNPTTGVINLPKIGPNGLP 331
Query: 322 SAKKQKSP 345
Q+ P
Sbjct: 332 IYPGQQQP 339
>Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 145 PPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKT-PNKPP 321
PP P+EP Q N +P+R + + F D N PP+ +P L K PN P
Sbjct: 276 PPNRHPNEPPQGGNIYEVPSR----DHYDFPPDAFNEEPPKTNPTTGVINLPKIGPNGLP 331
Query: 322 SAKKQKSP 345
Q+ P
Sbjct: 332 IYPGQQQP 339
>U67955-2|AAB07583.2| 791|Caenorhabditis elegans Hypothetical
protein C16H3.3a protein.
Length = 791
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 253 TSPPRQSPKKTPKILNKTPNKPP-SAKKQKSPIKVQKATERNDKVDSVGIQMQDN 414
+S P ++PK TP+ N TP+K +A K+K+ +KA K++++G + +++
Sbjct: 112 SSKPIKTPKPTPEKKN-TPSKAKLAAMKKKADAARRKAQREAKKLEALGEKQEED 165
>AF039720-5|AAB96696.1| 408|Caenorhabditis elegans Hypothetical
protein F33D11.2 protein.
Length = 408
Score = 29.9 bits (64), Expect = 1.2
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 136 TKLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNK 315
T LPP PAP PV + NA+ R +K I +D + P + + K
Sbjct: 71 TPLPPSPAPVTPVLE-NAKPRTIRKQKSTAEIELDSKPAEPKIVKQPIPAANLKGQLGTK 129
Query: 316 -PPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNK 417
A+K KS + V +A + + SV + ++ K
Sbjct: 130 REKKAEKVKSELVVPQAEAQKNTPKSVVARKKETK 164
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 2/87 (2%)
Frame = +1
Query: 136 TKLPPKPAPSE--PVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTP 309
T+ PPKPAP + PVQ+ + P+ + V T +P +P + P
Sbjct: 396 TQAPPKPAPQQAPPVQQNPPKPTPSPAPPAQKAQPV-----TQQQASAPPTSPSAPVQAP 450
Query: 310 NKPPSAKKQKSPIKVQKATERNDKVDS 390
N P + PI Q + + S
Sbjct: 451 NTPTQKASSQDPIVQQDPPPKEPSISS 477
>Z48783-5|CAA88699.1| 1385|Caenorhabditis elegans Hypothetical
protein F33H1.4 protein.
Length = 1385
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 148 PKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPP---RQSPKKTPKILNKTPNKP 318
P PAP+ K N+RG PA +R D V P R S ++ P + + +
Sbjct: 253 PPPAPAHLANKANSRGRPANPIPPHRRPVPKDLVPPGFPSLKRASSQRDPTPIKRKDTRE 312
Query: 319 PSAKKQKS 342
+ K Q+S
Sbjct: 313 VAEKVQES 320
>U23528-6|AAK31385.1| 216|Caenorhabditis elegans Hypothetical
protein B0034.4 protein.
Length = 216
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 283 TPKILNKTPNKPPSAKKQKSPIKVQKATERN 375
+PKI N T P+ KK+K + K TER+
Sbjct: 68 SPKISNSTVPTAPTPKKEKKVVATTKKTERS 98
>Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 351 FYWRFLFFCTWWFIRRFVKYFWSLFWRLSWR*RVHKIVNKNEPIFLS-DPSGHSPCIKFL 175
F + F+F W F F FW F LS + + K + + +F S D + S + FL
Sbjct: 172 FAFNFMFLRLWQFAAGFTALFWRDFQNLSSKSKEPKEPRETQRVFESNDVANCSVAVLFL 231
>Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 351 FYWRFLFFCTWWFIRRFVKYFWSLFWRLSWR*RVHKIVNKNEPIFLS-DPSGHSPCIKFL 175
F + F+F W F F FW F LS + + K + + +F S D + S + FL
Sbjct: 172 FAFNFMFLRLWQFAAGFTALFWRDFQNLSSKSKEPKEPRETQRVFESNDVANCSVAVLFL 231
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 139 KLPP-KPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILN 300
++PP K + SE ++ N G +KKN V DF+ +P + K P +N
Sbjct: 785 RIPPLKLSDSEKLRLDNIPGDKTETQKKNHTKLVADFIRNAPNNRILNKPPPRVN 839
>Z81454-2|CAB03804.2| 346|Caenorhabditis elegans Hypothetical
protein B0391.4 protein.
Length = 346
Score = 28.7 bits (61), Expect = 2.7
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 378 IIPLCSLLNFYWRFLFFCTW 319
I +CS++NF + +F+C W
Sbjct: 207 IFNICSIVNFQYAIMFYCGW 226
>Z50044-7|CAA90359.1| 1415|Caenorhabditis elegans Hypothetical
protein F22B5.7 protein.
Length = 1415
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 253 TSPPRQSPKKTPKILNKT-PNKPPSA-KKQKSPIKVQKATERNDKVDSVGIQMQDNK 417
T+PP++ P+ + + P KPP KK+K P+K + E + + DN+
Sbjct: 554 TAPPKKQPEDEEVVEEEDEPLKPPPGDKKKKVPVKENEENEPPVVAPKAELLLSDNE 610
>U80846-2|AAC70887.3| 516|Caenorhabditis elegans Hypothetical
protein K06A9.2 protein.
Length = 516
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 348 YWRFLFFCTWWFIRRFVKY 292
YW+ L F WW R+F +Y
Sbjct: 41 YWQKLMFKRWWVDRKFFRY 59
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 268 QSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVD 387
+SP K+P K+P KP KSP+K +K+ + + V+
Sbjct: 1461 KSPPKSPTKKEKSPEKPEDV---KSPVKKEKSPDATNIVE 1497
Score = 27.5 bits (58), Expect = 6.2
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +1
Query: 139 KLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSP--PRQSPKK-TPKILNKTP 309
K P K A E P+ KK D+ SP P + PK TPK K+P
Sbjct: 1813 KTPEKSAAEELKSPTKKEKSPSSPTKKTG----DESKEKSPEKPEEKPKSPTPK---KSP 1865
Query: 310 NKPPSAKKQKSP 345
P KK KSP
Sbjct: 1866 PGSPKKKKSKSP 1877
>AF035197-1|AAC17865.1| 1415|Caenorhabditis elegans ZYG-9 protein.
Length = 1415
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 253 TSPPRQSPKKTPKILNKT-PNKPPSA-KKQKSPIKVQKATERNDKVDSVGIQMQDNK 417
T+PP++ P+ + + P KPP KK+K P+K + E + + DN+
Sbjct: 554 TAPPKKQPEDEEVVEEEDEPLKPPPGDKKKKVPVKENEENEPPVVAPKAELLLSDNE 610
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 268 QSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVD 387
+SP K+P K+P KP KSP+K +K+ + + V+
Sbjct: 1461 KSPPKSPTKKEKSPEKPEDV---KSPVKKEKSPDATNIVE 1497
Score = 27.5 bits (58), Expect = 6.2
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +1
Query: 139 KLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSP--PRQSPKK-TPKILNKTP 309
K P K A E P+ KK D+ SP P + PK TPK K+P
Sbjct: 1813 KTPEKSAAEELKSPTKKEKSPSSPTKKTG----DESKEKSPEKPEEKPKSPTPK---KSP 1865
Query: 310 NKPPSAKKQKSP 345
P KK KSP
Sbjct: 1866 PGSPKKKKSKSP 1877
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 268 QSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVD 387
+SP K+P K+P KP KSP+K +K+ + + V+
Sbjct: 1461 KSPPKSPTKKEKSPEKPEDV---KSPVKKEKSPDATNIVE 1497
Score = 27.5 bits (58), Expect = 6.2
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +1
Query: 139 KLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSP--PRQSPKK-TPKILNKTP 309
K P K A E P+ KK D+ SP P + PK TPK K+P
Sbjct: 1813 KTPEKSAAEELKSPTKKEKSPSSPTKKTG----DESKEKSPEKPEEKPKSPTPK---KSP 1865
Query: 310 NKPPSAKKQKSP 345
P KK KSP
Sbjct: 1866 PGSPKKKKSKSP 1877
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 268 QSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVD 387
+SP K+P K+P KP KSP+K +K+ + + V+
Sbjct: 1461 KSPPKSPTKKEKSPEKPEDV---KSPVKKEKSPDATNIVE 1497
Score = 27.5 bits (58), Expect = 6.2
Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Frame = +1
Query: 139 KLPPKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSP--PRQSPKK-TPKILNKTP 309
K P K A E P+ KK D+ SP P + PK TPK K+P
Sbjct: 1813 KTPEKSAAEELKSPTKKEKSPSSPTKKTG----DESKEKSPEKPEEKPKSPTPK---KSP 1865
Query: 310 NKPPSAKKQKSP 345
P KK KSP
Sbjct: 1866 PGSPKKKKSKSP 1877
>Z81489-8|CAD60414.1| 120|Caenorhabditis elegans Hypothetical
protein C55A1.11 protein.
Length = 120
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +1
Query: 256 SPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQ 402
SP ++ K T P P + +KQ K+QK E+ K+ G+Q
Sbjct: 72 SPVKEEIKSTKGSEYLNPEPPANFQKQLPSAKIQKEEEKLPKLKDSGLQ 120
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 259 PPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATE 369
PPR P++ PK + + PP A P+ V+KA E
Sbjct: 179 PPRPPPQEPPKPVEQAAPPPPPA---PMPVPVEKAPE 212
>U55376-3|AAA98005.3| 525|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 45 protein.
Length = 525
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 427 RIGMRLRNLLKLPKAHKWVCFEYFYS 504
R M +R +LPK KW+ F++F++
Sbjct: 320 RFCMSIRVFAQLPKDQKWIIFKHFWT 345
>Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical
protein K04C1.2b protein.
Length = 534
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 256 SPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRI 432
SPP S K+ L K +AK S VQK ++ + + S G++ QD R+
Sbjct: 239 SPPNLSNKRKAAPLKFGNEKVKAAKLFDSVPPVQKCSKNSVEATSPGMESQDVNESRRL 297
>Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical
protein K04C1.2a protein.
Length = 525
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 256 SPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRI 432
SPP S K+ L K +AK S VQK ++ + + S G++ QD R+
Sbjct: 230 SPPNLSNKRKAAPLKFGNEKVKAAKLFDSVPPVQKCSKNSVEATSPGMESQDVNESRRL 288
>AL033514-26|CAA22110.1| 1144|Caenorhabditis elegans Hypothetical
protein Y75B8A.26 protein.
Length = 1144
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 17 LHQDHSKRLKMSQWKWIFRXXXXXNL----QHSDLQHWACIELVQ 139
LHQ SK + + Q +F NL Q+SD Q W C+E+ Q
Sbjct: 974 LHQLRSKLIIIPQEPVVFSGTLRFNLDPFNQYSDDQIWNCLEICQ 1018
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +1
Query: 256 SPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNK 417
S ++ PKK + + K S K +K K ++A + +DK D + +++K
Sbjct: 57 SEKKEEPKKEEEPKKEEEKKEKSKKSEKKDDKKEEAKKEDDKKDEKKDEKKEDK 110
>AF040659-3|AAK39392.1| 919|Caenorhabditis elegans Hypothetical
protein ZK484.4a protein.
Length = 919
Score = 27.9 bits (59), Expect = 4.7
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Frame = +1
Query: 199 PARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNK-------PPSAKKQKSPIKVQ 357
PAR + +R + FV +P + KKT K+ N+ S K+K+ +
Sbjct: 419 PARTTRTSRSDYKHFFVEDTPDEKYQKKTTKVEEIEMNEEEDGEIGAESTSKRKTVTIKE 478
Query: 358 KATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKL 462
+ E + ++ +G R RL +L+KL
Sbjct: 479 EIDEEVKQTPMAKLRASAKLNGKRCSKRLSDLVKL 513
>AF040659-2|AAK39393.1| 873|Caenorhabditis elegans Hypothetical
protein ZK484.4b protein.
Length = 873
Score = 27.9 bits (59), Expect = 4.7
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Frame = +1
Query: 199 PARIRKKNRFIFVDDFVNTSPPRQSPKKTPKILNKTPNK-------PPSAKKQKSPIKVQ 357
PAR + +R + FV +P + KKT K+ N+ S K+K+ +
Sbjct: 419 PARTTRTSRSDYKHFFVEDTPDEKYQKKTTKVEEIEMNEEEDGEIGAESTSKRKTVTIKE 478
Query: 358 KATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLKL 462
+ E + ++ +G R RL +L+KL
Sbjct: 479 EIDEEVKQTPMAKLRASAKLNGKRCSKRLSDLVKL 513
>U97014-3|AAB52427.3| 856|Caenorhabditis elegans Hypothetical
protein T05E8.3 protein.
Length = 856
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 280 KTPKILNKTPNKPPSAKKQKSPIKVQK 360
+TPK L KTP PS K +P+ +K
Sbjct: 112 QTPKKLPKTPISTPSNSKNATPMSTRK 138
>U46675-7|AAB52641.1| 1274|Caenorhabditis elegans Hypothetical
protein F35A5.1 protein.
Length = 1274
Score = 27.5 bits (58), Expect = 6.2
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +1
Query: 148 PKPAPSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPR--QSPKKTPKILNKTPNKP- 318
PK A +EP + KK + + DD P + KKTP + KTP KP
Sbjct: 772 PKKAKAEPNSPVVPPTPVKNPVKKWKPPWEDDDAPAEPVNVPEPEKKTPVLAKKTPVKPR 831
Query: 319 -PSAKK 333
PS KK
Sbjct: 832 DPSPKK 837
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 262 PRQSPKKTPKILNKTPNKPPSAKK 333
P + KKTP + K P KP A K
Sbjct: 907 PSEPEKKTPVLAKKEPEKPKDAPK 930
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 262 PRQSPKKTPKILNKTPNKPPSAKKQKSPI 348
P ++PKKTPK L + P +++ PI
Sbjct: 152 PSKTPKKTPKSLKRRALTPSDDEEEAGPI 180
>AC199169-1|ABO33259.1| 450|Caenorhabditis elegans Hypothetical
protein F38A1.8 protein.
Length = 450
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +1
Query: 235 VDDFVNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKAT 366
+D + + P +++ +K+ K KTP KP + ++ S A+
Sbjct: 154 IDSLIVSRPGQKNAEKSAKNAEKTPKKPVESAEESSATDYNSAS 197
>Z81109-17|CAB03241.2| 497|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 497
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 247 VNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSP 345
+ T PP+Q KT + + PPS K+ SP
Sbjct: 442 IRTLPPKQKHTKTSSTSSVSHQTPPSPIKKPSP 474
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 262 PRQSPKKTPKIL--NKTPNKPPSAKKQKSPIKVQKATERNDKVDSV 393
P + KKT + N TP+ A K+P +K E N+ + V
Sbjct: 302 PTPTTKKTQSVTPSNSTPSPAKPATPTKTPTPTKKPVENNETLSQV 347
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 14/84 (16%)
Frame = +1
Query: 133 GTKLPPKPAPSEPVQKLNARGMPA------------RIRKKNRFIFVDDFVNTSPP--RQ 270
GT+ P + S P ++N PA R +K R I D+ T+PP R
Sbjct: 1460 GTERPASRSASRPESRINQMKYPAPRLVERSSSQNVRSPRKARNIEADE---TTPPSKRS 1516
Query: 271 SPKKTPKILNKTPNKPPSAKKQKS 342
+ TPK P P S KK+K+
Sbjct: 1517 NSASTPKRSPMKPLTPSSKKKEKA 1540
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 27.1 bits (57), Expect = 8.1
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +1
Query: 157 APSEPVQKLNARGMPARIRKKNRFIFVDDFVNTSPPRQ----SPKKTPKILNKTPNKPPS 324
+P P +K N +NR D + SPPR+ S P+ K + PS
Sbjct: 117 SPPRPSRKRNDSDNSPPRPSRNRH---DSDKDNSPPRRRRHDSDNSPPRPSRKIREESPS 173
Query: 325 AKKQKSPIKVQKATERNDKVDS 390
A+ ++SP + ++ +R+D +S
Sbjct: 174 ARNRRSPPRTRR--DRHDSDNS 193
>U80839-15|AAB37911.1| 430|Caenorhabditis elegans Hypothetical
protein ZC204.2 protein.
Length = 430
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = +1
Query: 280 KTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNKSGHRIGMRLRNLLK 459
+TP+ + P K P + + SP+ E ++ + +Q+ +N R+ L + L+
Sbjct: 180 RTPEESHCAPEKSPESTENASPLSSSAEPETPEETSTSMVQIPENFKNKRLSQDLVDKLQ 239
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 247 VNTSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKAT 366
V +S PRQ P++ I+NK + K++K +K +++T
Sbjct: 738 VESSTPRQLPERWKAIVNKFKHNLEVLKEKKRLLKEKEST 777
>U42841-7|AAM97957.1| 447|Caenorhabditis elegans Gex interacting
protein protein16, isoform i protein.
Length = 447
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +1
Query: 253 TSPPRQSPKKTPKILNKTPNKPPSAKKQKSPIKVQKATERNDKVDSVGIQMQDNK 417
T + P P + KTP PP ++ + K + S I++QD+K
Sbjct: 9 TKDANKGPVTVPPLRTKTPPPPPPPVRRHEIYEQHKRYTSAPNLQSAVIRIQDDK 63
>AC024754-1|AAK71405.1| 394|Caenorhabditis elegans Hypothetical
protein Y32G9B.1 protein.
Length = 394
Score = 27.1 bits (57), Expect = 8.1
Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 12/115 (10%)
Frame = +1
Query: 145 PPKPAPSE-PVQKLNARGMPARIRKKNRFIFVDDFVNTS----PPRQSPKK---TPKILN 300
P P P + P Q + + +N F+ D + S PP P P +
Sbjct: 47 PKPPTPEQRPSQMIGGAIQNLAFQGRNAFLQALDKLEASGASTPPTPPPSTFPTLPPLTF 106
Query: 301 KTPNKPPSAKKQKSPIKVQKATERNDKVDSVG----IQMQDNKSGHRIGMRLRNL 453
TP+ PP + K E ND +G + ++D K +G ++R +
Sbjct: 107 GTPSTPPPPATLPPMFGIPKQQESNDNTFDMGGRDVLGVRDFKKNVAMGEKIREI 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,775,825
Number of Sequences: 27780
Number of extensions: 252742
Number of successful extensions: 1008
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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