Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303D01f
         (382 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    33   1.4  
UniRef50_A6EPP4 Cluster: Putative uncharacterized protein; n=1; ...    31   9.6  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 33.5 bits (73), Expect = 1.4
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +2

Query: 341 RGGARYPIRPIVSR 382
           RGGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273


>UniRef50_A6EPP4 Cluster: Putative uncharacterized protein; n=1;
           unidentified eubacterium SCB49|Rep: Putative
           uncharacterized protein - unidentified eubacterium SCB49
          Length = 288

 Score = 30.7 bits (66), Expect = 9.6
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -1

Query: 235 KMTNKEHNNLFIFAEQQCPLRTVRNIAPPAAT 140
           K TN   NNLFIFA+   P ++V  +  P+ T
Sbjct: 227 KATNANGNNLFIFAQGNTPAQSVHILKNPSDT 258


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,704,316
Number of Sequences: 1657284
Number of extensions: 3410165
Number of successful extensions: 8836
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8836
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)