Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C12f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          24   2.7  
DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    24   2.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   8.2  

>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 182 RTSFSYLAGWKNHCS 226
           R  F+   GWKNHC+
Sbjct: 115 RHGFNAWYGWKNHCN 129


>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.
          Length = 140

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 182 RTSFSYLAGWKNHCS 226
           R  F+   GWKNHC+
Sbjct: 115 RHGFNAWYGWKNHCN 129


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -3

Query: 372 FITLWENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 262
           FI+ W+   VY+ +H   YN+   +S  T    S  R
Sbjct: 392 FISHWQEEGVYWSLHYL-YNRLRDISEETSALPSHPR 427


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
 Frame = -3

Query: 255 YGGNSADSTR-EQWFFQPAKYENDVLFFI 172
           YG    +  R E WF Q A    DV+  +
Sbjct: 246 YGSKEINDFRSEDWFIQAASSPKDVIILL 274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,645
Number of Sequences: 2352
Number of extensions: 10266
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)