Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303C12f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.5
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 4.4
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 4.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 5.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 5.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.7
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 357 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 262
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 357 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 262
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 357 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 262
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 357 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 262
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 357 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 262
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 357 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 262
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 357 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 262
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +1
Query: 43 RCNEPRVDVRKTGDFTIVSNGLAVSRG 123
+CN+ + D+ +TG +G SRG
Sbjct: 67 QCNDKKTDIEETGRGKGRGHGKGGSRG 93
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 4.4
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = +1
Query: 1 HYS*TYNSVFGRLER 45
HY+ Y+S++GR +R
Sbjct: 597 HYNLPYSSLYGRFKR 611
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 5.8
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -3
Query: 360 WENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 262
+ +R Y K+HN K + + N SR+R
Sbjct: 12 YRKDRRYEKLHNEKEKLLEERTNRKRNSRSRER 44
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 5.8
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -3
Query: 360 WENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 262
+ +R Y K+HN K + + N SR+R
Sbjct: 12 YRKDRRYEKLHNEKEKLLEERTNRKRNSRSRER 44
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 411 DGVDKHTELVSWK 373
D +D+HT V+WK
Sbjct: 986 DDLDQHTLKVTWK 998
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,397
Number of Sequences: 438
Number of extensions: 2980
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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