Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C09f
         (492 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.35 
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   4.3  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   5.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    22   9.9  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 0.35
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 111 PQSSTAGHRPLPIHTTEPGLRLSSSTSCRLPFGG 212
           P S + G  P+P+    P     S  S R P+GG
Sbjct: 840 PFSPSGGTTPVPVSLLSPASSHYSQRSARSPYGG 873


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 108 SPQSSTAGHRPLPIHTTEPGLRLSSSTSCRL 200
           SP ++      LP+    P + L+SS+SC L
Sbjct: 164 SPAAAVRSDSSLPMRHYVPHISLNSSSSCFL 194


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 222 WCDDLRTVAGKKWMRR 175
           WC  LR    ++W+RR
Sbjct: 773 WCHTLRFANRRQWLRR 788


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
 Frame = +3

Query: 81  LSXXXXXXNSPQSSTAGHRPLPIHTTEPGLRLSSSTS-----CRLPFGGHRTT*P 230
           LS      N+   S AGH P P H +   L LS+  S        P GGH    P
Sbjct: 666 LSHTAALANAQNLSLAGHIPPPAHGS---LNLSAGGSPVAVVSSSPTGGHHLASP 717


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,556
Number of Sequences: 2352
Number of extensions: 8423
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)