BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ovS303C09f (492 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 27 0.35 M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 4.3 AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 23 5.7 AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 22 9.9 >DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methoprene-tolerant protein protein. Length = 1115 Score = 27.1 bits (57), Expect = 0.35 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = +3 Query: 111 PQSSTAGHRPLPIHTTEPGLRLSSSTSCRLPFGG 212 P S + G P+P+ P S S R P+GG Sbjct: 840 PFSPSGGTTPVPVSLLSPASSHYSQRSARSPYGG 873 >M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles gambiae T1 retroposon. ). Length = 975 Score = 23.4 bits (48), Expect = 4.3 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = +3 Query: 108 SPQSSTAGHRPLPIHTTEPGLRLSSSTSCRL 200 SP ++ LP+ P + L+SS+SC L Sbjct: 164 SPAAAVRSDSSLPMRHYVPHISLNSSSSCFL 194 >AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase protein. Length = 1009 Score = 23.0 bits (47), Expect = 5.7 Identities = 7/16 (43%), Positives = 10/16 (62%) Frame = -1 Query: 222 WCDDLRTVAGKKWMRR 175 WC LR ++W+RR Sbjct: 773 WCHTLRFANRRQWLRR 788 >AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative differentiation regulator protein. Length = 1283 Score = 22.2 bits (45), Expect = 9.9 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 5/55 (9%) Frame = +3 Query: 81 LSXXXXXXNSPQSSTAGHRPLPIHTTEPGLRLSSSTS-----CRLPFGGHRTT*P 230 LS N+ S AGH P P H + L LS+ S P GGH P Sbjct: 666 LSHTAALANAQNLSLAGHIPPPAHGS---LNLSAGGSPVAVVSSSPTGGHHLASP 717 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 474,556 Number of Sequences: 2352 Number of extensions: 8423 Number of successful extensions: 31 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 31 length of database: 563,979 effective HSP length: 60 effective length of database: 422,859 effective search space used: 43554477 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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