Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS303C09f
(492 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U17986-1|AAA86990.1| 732|Homo sapiens GABA/noradrenaline transp... 31 1.6
X99832-1|CAA68148.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
U32680-1|AAB51075.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
DQ422807-1|ABD72606.1| 1427|Homo sapiens ADAM metallopeptidase w... 30 5.0
BC111068-1|AAI11069.1| 360|Homo sapiens CLN3 protein protein. 30 5.0
BC004433-1|AAH04433.1| 438|Homo sapiens ceroid-lipofuscinosis, ... 30 5.0
BC002394-1|AAH02394.1| 438|Homo sapiens ceroid-lipofuscinosis, ... 30 5.0
AY055376-1|AAL17652.1| 1427|Homo sapiens von Willebrand factor-c... 30 5.0
AL593848-11|CAI17258.1| 1371|Homo sapiens ADAM metallopeptidase ... 30 5.0
AL593848-10|CAI17256.1| 1427|Homo sapiens ADAM metallopeptidase ... 30 5.0
AL158826-24|CAI12851.1| 1371|Homo sapiens ADAM metallopeptidase ... 30 5.0
AL158826-23|CAI12850.1| 1427|Homo sapiens ADAM metallopeptidase ... 30 5.0
AJ420810-1|CAD12729.1| 1371|Homo sapiens ADAMTS-13 protein, vari... 30 5.0
AF414401-1|AAL11095.1| 1427|Homo sapiens ADAMTS13 protein. 30 5.0
AF078169-1|AAD48543.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
AF077972-1|AAD51494.1| 421|Homo sapiens CLN3 protein protein. 30 5.0
AF077971-1|AAD51493.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
AF077966-1|AAD51488.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
AF077963-1|AAD51485.1| 321|Homo sapiens CLN3 protein protein. 30 5.0
AF077962-1|AAD51484.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
AF077961-1|AAD51483.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
AF077959-1|AAD51481.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
AF077958-1|AAD51480.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
AF077957-1|AAD51479.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
AF077956-1|AAD51478.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
AF015594-1|AAD01556.1| 320|Homo sapiens CLN3 protein protein. 30 5.0
AF015593-1|AAD01555.1| 438|Homo sapiens CLN3 protein protein. 30 5.0
AC002544-5|AAC27430.1| 438|Homo sapiens CLN protein. 30 5.0
AC002425-3|AAC05337.1| 438|Homo sapiens CLN3 protein. 30 5.0
AB069698-1|BAB69487.2| 1427|Homo sapiens von Willebrand factor-c... 30 5.0
>U17986-1|AAA86990.1| 732|Homo sapiens GABA/noradrenaline
transporter protein.
Length = 732
Score = 31.5 bits (68), Expect = 1.6
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -2
Query: 284 WPYTSGXRAAEDVTWVAPWLGGAMTSER*PARSG 183
WP G A W PWLGG PAR G
Sbjct: 208 WPGLPGRSLAPSFLWREPWLGGQWGPLNIPARKG 241
>X99832-1|CAA68148.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>U32680-1|AAB51075.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>DQ422807-1|ABD72606.1| 1427|Homo sapiens ADAM metallopeptidase with
thrombospondin type 1 motif, 13 protein.
Length = 1427
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 111 PQSSTAGHRPLPIHTTEPGLRLSSSTSCRLPFG 209
PQ +AGH P +PGL S++ CR+ FG
Sbjct: 288 PQPGSAGHPP----DAQPGLYYSANEQCRVAFG 316
>BC111068-1|AAI11069.1| 360|Homo sapiens CLN3 protein protein.
Length = 360
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 124 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 176
>BC004433-1|AAH04433.1| 438|Homo sapiens ceroid-lipofuscinosis,
neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>BC002394-1|AAH02394.1| 438|Homo sapiens ceroid-lipofuscinosis,
neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AY055376-1|AAL17652.1| 1427|Homo sapiens von Willebrand
factor-cleaving protease precursor protein.
Length = 1427
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 111 PQSSTAGHRPLPIHTTEPGLRLSSSTSCRLPFG 209
PQ +AGH P +PGL S++ CR+ FG
Sbjct: 288 PQPGSAGHPP----DAQPGLYYSANEQCRVAFG 316
>AL593848-11|CAI17258.1| 1371|Homo sapiens ADAM metallopeptidase
with thrombospondin type 1 motif, 13 protein.
Length = 1371
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 111 PQSSTAGHRPLPIHTTEPGLRLSSSTSCRLPFG 209
PQ +AGH P +PGL S++ CR+ FG
Sbjct: 288 PQPGSAGHPP----DAQPGLYYSANEQCRVAFG 316
>AL593848-10|CAI17256.1| 1427|Homo sapiens ADAM metallopeptidase
with thrombospondin type 1 motif, 13 protein.
Length = 1427
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 111 PQSSTAGHRPLPIHTTEPGLRLSSSTSCRLPFG 209
PQ +AGH P +PGL S++ CR+ FG
Sbjct: 288 PQPGSAGHPP----DAQPGLYYSANEQCRVAFG 316
>AL158826-24|CAI12851.1| 1371|Homo sapiens ADAM metallopeptidase
with thrombospondin type 1 motif, 13 protein.
Length = 1371
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 111 PQSSTAGHRPLPIHTTEPGLRLSSSTSCRLPFG 209
PQ +AGH P +PGL S++ CR+ FG
Sbjct: 288 PQPGSAGHPP----DAQPGLYYSANEQCRVAFG 316
>AL158826-23|CAI12850.1| 1427|Homo sapiens ADAM metallopeptidase
with thrombospondin type 1 motif, 13 protein.
Length = 1427
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 111 PQSSTAGHRPLPIHTTEPGLRLSSSTSCRLPFG 209
PQ +AGH P +PGL S++ CR+ FG
Sbjct: 288 PQPGSAGHPP----DAQPGLYYSANEQCRVAFG 316
>AJ420810-1|CAD12729.1| 1371|Homo sapiens ADAMTS-13 protein, variant
2 protein.
Length = 1371
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 111 PQSSTAGHRPLPIHTTEPGLRLSSSTSCRLPFG 209
PQ +AGH P +PGL S++ CR+ FG
Sbjct: 288 PQPGSAGHPP----DAQPGLYYSANEQCRVAFG 316
>AF414401-1|AAL11095.1| 1427|Homo sapiens ADAMTS13 protein.
Length = 1427
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 111 PQSSTAGHRPLPIHTTEPGLRLSSSTSCRLPFG 209
PQ +AGH P +PGL S++ CR+ FG
Sbjct: 288 PQPGSAGHPP----DAQPGLYYSANEQCRVAFG 316
>AF078169-1|AAD48543.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AF077972-1|AAD51494.1| 421|Homo sapiens CLN3 protein protein.
Length = 421
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AF077971-1|AAD51493.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AF077966-1|AAD51488.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AF077963-1|AAD51485.1| 321|Homo sapiens CLN3 protein protein.
Length = 321
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AF077962-1|AAD51484.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AF077961-1|AAD51483.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AF077959-1|AAD51481.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AF077958-1|AAD51480.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AF077957-1|AAD51479.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AF077956-1|AAD51478.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AF015594-1|AAD01556.1| 320|Homo sapiens CLN3 protein protein.
Length = 320
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 173 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 225
>AF015593-1|AAD01555.1| 438|Homo sapiens CLN3 protein protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AC002544-5|AAC27430.1| 438|Homo sapiens CLN protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AC002425-3|AAC05337.1| 438|Homo sapiens CLN3 protein.
Length = 438
Score = 29.9 bits (64), Expect = 5.0
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 124 LLDIGLSQSTPLSPVYGSPHPLLAGYRSEVIAPPSQ--GATHVTSSAARXPLV 276
L GLS L + G P LLA Y + +P +Q G SAAR PL+
Sbjct: 202 LTQAGLSPQQTLLSMLGIPALLLASYFLLLTSPEAQDPGGEEEAESAARQPLI 254
>AB069698-1|BAB69487.2| 1427|Homo sapiens von Willebrand
factor-cleaving protease protein.
Length = 1427
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 111 PQSSTAGHRPLPIHTTEPGLRLSSSTSCRLPFG 209
PQ +AGH P +PGL S++ CR+ FG
Sbjct: 288 PQPGSAGHPP----DAQPGLYYSANEQCRVAFG 316
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,842,667
Number of Sequences: 237096
Number of extensions: 1320274
Number of successful extensions: 2592
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2589
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -