Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS303C09f
         (492 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   2.3  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   4.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   5.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   5.4  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   5.4  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   7.1  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.4  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 293 PLQLADSLSYPDDFSSLSNNLIPEL 367
           P  + +S +  D F+ ++NN I EL
Sbjct: 564 PSNIEESNNMTDSFTRIANNTIQEL 588


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 352 VVRQRTKVIGIAQRVSKLK 296
           +V +  KVIGIA +V K+K
Sbjct: 27  LVGKGMKVIGIAPQVDKMK 45


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
          phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 34 YLYYDFIP 57
          YLYYDF P
Sbjct: 28 YLYYDFYP 35


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
          precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 34 YLYYDFIP 57
          YLYYDF P
Sbjct: 43 YLYYDFYP 50


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
          precursor protein.
          Length = 156

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = +1

Query: 7  SFMKLHFFIYLYYD 48
          SF+ +++FI+LY++
Sbjct: 15 SFILINYFIFLYFN 28


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/37 (24%), Positives = 22/37 (59%)
 Frame = +2

Query: 302 LADSLSYPDDFSSLSNNLIPELSKN*Y*FILNVLVLP 412
           L+++ +Y +++++ +NN      K  Y  I+N+  +P
Sbjct: 88  LSNNYNYNNNYNNYNNNYNTNYKKLQYYNIINIEQIP 124


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 336 VLCRTTSFRNYRKISTDSY 392
           V+C T S  N   IS D Y
Sbjct: 106 VMCSTASILNLCAISLDRY 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,573
Number of Sequences: 438
Number of extensions: 2650
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)